RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ANP32EQ9BTT0 268 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 BCL2L13Q9BXK5 485 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 STK31Q9BXU1 1019 aa5.49□□□□□ -1.53
SNHG1-208ENST00000538266 TMEM238LA0A1B0GVL6 79 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 SOX1O00570 391 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-208ENST00000538266 GIPC1O14908 333 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 FSCN2O14926 492 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 SPATA31C1P0DKV0 1188 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 CYP19A1P11511 503 aaPredicted RBP5.48□□□□□ -1.53
SNHG1-208ENST00000538266 CANXP27824 592 aaKnown RBP5.48□□□□□ -1.53
SNHG1-208ENST00000538266 EXOSC9Q06265 439 aaKnown RBP5.48□□□□□ -1.53
SNHG1-208ENST00000538266 IKBKEQ14164 716 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 SETDB1Q15047 1291 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 GRIK4Q16099 956 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 KRT24Q2M2I5 525 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 CCDC30Q5VVM6 783 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 VN1R5Q7Z5H4 357 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 FBXO33Q7Z6M2 555 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 FBXO11Q86XK2 927 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 FLAD1Q8NFF5 587 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 SLC7A3Q8WY07 619 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 FRMD6Q96NE9 622 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 OSBPL7Q9BZF2 842 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 RNF19AQ9NV58 838 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 PODXL2Q9NZ53 605 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 PARP2Q9UGN5 583 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 SOX13Q9UN79 622 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 USP16Q9Y5T5 823 aa5.48□□□□□ -1.53
SNHG1-208ENST00000538266 PRAMEF22A3QJZ6 481 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 H3BRJ5 948 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 DEAF1O75398 565 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-208ENST00000538266 GDF11O95390 407 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 CT47B1P0C2W7 299 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-208ENST00000538266 MYL6BP14649 208 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 GNA15P30679 374 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 RFC4P35249 363 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 ARL4DP49703 201 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 FCGRTP55899 365 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 SLC15A2Q16348 729 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 ZNF827Q17R98 1081 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 DTHD1Q6ZMT9 781 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 ALYREFQ86V81 257 aaKnown RBP5.47□□□□□ -1.53
SNHG1-208ENST00000538266 MAP4K3Q8IVH8 894 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 FMR1NBQ8N0W7 255 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-208ENST00000538266 TSPYL6Q8N831 410 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 C8orf58Q8NAV2 365 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 GLIS3Q8NEA6 775 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 KLHDC7BQ96G42 594 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 ZFYVE1Q9HBF4 777 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 CHPF2Q9P2E5 772 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 DBF4Q9UBU7 674 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-208ENST00000538266 AKAP2Q9Y2D5 859 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 ZBTB1Q9Y2K1 713 aa5.47□□□□□ -1.53
SNHG1-208ENST00000538266 COL15A1P39059 1388 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 UBR3Q6ZT12 1888 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 A0A087WZG4 1122 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 RPS6KA4O75676 772 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 A1BGP04217 495 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 ESRRAP11474 423 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 ELNP15502 786 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 ITPKAP23677 461 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 IL6STP40189 918 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 PIP4K2AP48426 406 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 GSK3AP49840 483 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 PSMD2Q13200 908 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 R3HDM1Q15032 1099 aaKnown RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 ZNF423Q2M1K9 1284 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 PRPF40BQ6NWY9 871 aaKnown RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 INTS5Q6P9B9 1019 aaKnown RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 KIF6Q6ZMV9 814 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 TMEM151AQ8N4L1 468 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 KLHL23Q8NBE8 558 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 GALNT11Q8NCW6 608 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 GIPC2Q8TF65 315 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 ZNF428Q96B54 188 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 SRCIN1Q9C0H9 1055 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 CLEC4MQ9H2X3 399 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 SRA1Q9HD15 236 aaKnown RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 ABCB6Q9NP58 842 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 OSGEPQ9NPF4 335 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 SEC31BQ9NQW1 1179 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 HYPKQ9NX55 129 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 ZNF652Q9Y2D9 606 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 AK5Q9Y6K8 562 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 EP400Q96L91 3159 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 TUBGCP6Q96RT7 1819 aa5.46□□□□□ -1.54
SNHG1-208ENST00000538266 MYH14Q7Z406 1995 aaKnown RBP5.46□□□□□ -1.54
SNHG1-208ENST00000538266 C4AP0C0L4 1744 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 QSER1Q2KHR3 1735 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 KRBA1A5PL33 1030 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 DLL1O00548 723 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 TCERG1O14776 1098 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 VAMP4O75379 141 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 DDX58O95786 925 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 XRCC5P13010 732 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 EIF4BP23588 611 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 CD68P34810 354 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 PTPN12Q05209 780 aaKnown RBP5.45□□□□□ -1.54
SNHG1-208ENST00000538266 PCDH1Q08174 1060 aa5.45□□□□□ -1.54
SNHG1-208ENST00000538266 C19orf57Q0VDD7 668 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms