RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DYNLL1P63167 89 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 HMGN5P82970 282 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 TFAP4Q01664 338 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 GABPAQ06546 454 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 DMTNQ08495 405 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 RAB3GAP1Q15042 981 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SAFBQ15424 915 aaKnown RBP eCLIP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 FAM110CQ1W6H9 321 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 TMEM67Q5HYA8 995 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 RRP12Q5JTH9 1297 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 LBX2Q6XYB7 198 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 DHX32Q7L7V1 743 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 PRRT2Q7Z6L0 340 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 GPRC5AQ8NFJ5 357 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 TRIM44Q96DX7 344 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SAP30BPQ9UHR5 308 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 RBM8AQ9Y5S9 174 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SLC12A7Q9Y666 1083 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 PFASO15067 1338 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ABCB11O95342 1321 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SBF1O95248 1867 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 CCDC88AQ3V6T2 1871 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 FOSP01100 380 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 GH2P01242 217 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 PDCP20941 246 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 CALML3P27482 149 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 KIF23Q02241 960 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 VGLL4Q14135 290 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 KCTD2Q14681 263 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 MFSD14CQ5VZR4 134 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SLFN13Q68D06 897 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 KCNV1Q6PIU1 500 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ARMCX6Q7L4S7 300 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 NUP133Q8WUM0 1156 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 OTUD5Q96G74 571 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 TRIM47Q96LD4 638 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 TEPSINQ96N21 525 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ZSCAN10Q96SZ4 725 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SLF1Q9BQI6 1058 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ALDH8A1Q9H2A2 487 aaPredicted RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ANTXR1Q9H6X2 564 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ASB14A6NK59 587 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 ZEB2O60315 1214 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 FGAP02671 866 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 RGS2P41220 211 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 CTU1Q7Z7A3 348 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 RRP36Q96EU6 259 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 CDHR1Q96JP9 859 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 PUS7LQ9H0K6 701 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 KCNQ5Q9NR82 932 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 PALD1Q9ULE6 856 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 STX8Q9UNK0 236 aa4.14□□□□□ -1.75
PTPN22-211ENST00000538253 DIS3Q9Y2L1 958 aaKnown RBP4.14□□□□□ -1.75
PTPN22-211ENST00000538253 SLC15A5A6NIM6 579 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 STAM2O75886 525 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 STAT2P52630 851 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 SP3Q02447 781 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 SPP2Q13103 211 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 IFNL1Q8IU54 200 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 FBXL16Q8N461 479 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 SLAIN1Q8ND83 568 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 CCDC34Q96HJ3 373 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 TMEM106CQ9BVX2 250 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 TEX13BQ9BXU2 312 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 MTMR4Q9NYA4 1195 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 MORF4L1Q9UBU8 362 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 SNCAIPQ9Y6H5 919 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 CACNA1SQ13698 1873 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 M0R2C6 588 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 DKC1O60832 514 aaKnown RBP eCLIP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 GNA11P29992 359 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 CREB3L3Q68CJ9 461 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 PI16Q6UXB8 463 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 OTUD6BQ8N6M0 293 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 MXD3Q9BW11 206 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 EFCC1Q9HA90 598 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 GEMIN8Q9NWZ8 242 aaKnown RBP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 MKRN1Q9UHC7 482 aaKnown RBP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 AFG3L2Q9Y4W6 797 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 MYH13Q9UKX3 1938 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 ATP2A1O14983 1001 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 ZBTB43O43298 467 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 KPNA6O60684 536 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 FLOT1O75955 427 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 RASA1P20936 1047 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 SHMT1P34896 483 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 NFIAQ12857 509 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 TSHZ1Q6ZSZ6 1077 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 ZNF513Q8N8E2 541 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 GIMAP8Q8ND71 665 aaPredicted RBP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 SDR42E1Q8WUS8 393 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 NUDT12Q9BQG2 462 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 LLPHQ9BRT6 129 aaKnown RBP4.13□□□□□ -1.75
PTPN22-211ENST00000538253 CLIP2Q9UDT6 1046 aa4.13□□□□□ -1.75
PTPN22-211ENST00000538253 A0A0D9SFI3 127 aa4.12□□□□□ -1.75
PTPN22-211ENST00000538253 DDTLA6NHG4 134 aaPredicted RBP4.12□□□□□ -1.75
PTPN22-211ENST00000538253 PDHXO00330 501 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms