RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 UTRNP46939 3433 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 AFF2P51816 1311 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 CNTNAP4Q9C0A0 1308 aa9.87□□□□□ -0.83
UBE3B-208ENST00000538070 MYH3P11055 1940 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 COL14A1Q05707 1796 aaKnown RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 TRIM49BA6NDI0 452 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 SLFN14P0C7P3 912 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 SLC16A2P36021 539 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 CDK8P49336 464 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 FILIP1LQ4L180 1135 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 KANK3Q6NY19 840 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 TOGARAM2Q6ZUX3 1019 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 VSTM4Q8IW00 320 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 GJA10Q969M2 543 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 NUP88Q99567 741 aaPredicted RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 TMEM60Q9H2L4 133 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 IMPACTQ9P2X3 320 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 ABCA3Q99758 1704 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 TXKP42681 527 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 WWC2Q6AWC2 1192 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 GJD4Q96KN9 370 aaPredicted RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 PIGSQ96S52 555 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 OSBPL5Q9H0X9 879 aaPredicted RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 INTS13Q9NVM9 706 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 TMEM260Q9NX78 707 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 PAPPAQ13219 1627 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 SOWAHDA6NJG2 315 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 USP17L5A8MUK1 530 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 PARP1P09874 1014 aaKnown RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 TECP42680 631 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 GSTO1P78417 241 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 MDM2Q00987 491 aaPredicted RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 PFKFB3Q16875 520 aaPredicted RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 SPECC1LQ69YQ0 1117 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 HPS3Q969F9 1004 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 ZC3H12CQ9C0D7 883 aaKnown RBP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 POLLQ9UGP5 575 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.86□□□□□ -0.83
UBE3B-208ENST00000538070 MYH7P12883 1935 aa9.86□□□□□ -0.83
UBE3B-208ENST00000538070 SMCO2A6NFE2 343 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 SEMA3EO15041 775 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 IDEP14735 1019 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 TNNI2P48788 182 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 MORC3Q14149 939 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 DPP8Q6V1X1 898 aaPredicted RBP9.85□□□□□ -0.83
UBE3B-208ENST00000538070 CEP95Q96GE4 821 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 BPIFA3Q9BQP9 254 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 TMX4Q9H1E5 349 aaPredicted RBP9.85□□□□□ -0.83
UBE3B-208ENST00000538070 QTRT2Q9H974 415 aaKnown RBP9.85□□□□□ -0.83
UBE3B-208ENST00000538070 DBNDD1Q9H9R9 158 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 TEX35Q5T0J7 233 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 RBM17Q96I25 401 aaKnown RBP9.85□□□□□ -0.83
UBE3B-208ENST00000538070 MED15Q96RN5 788 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 CARD6Q9BX69 1037 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 ZHX3Q9H4I2 956 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 TTF2Q9UNY4 1162 aaKnown RBP9.85□□□□□ -0.83
UBE3B-208ENST00000538070 A0A0U1RQJ8 604 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 CYTH3O43739 400 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 ORC4O43929 436 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 SLU7O95391 586 aaKnown RBP9.85□□□□□ -0.83
UBE3B-208ENST00000538070 SNAP25P60880 206 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 RBL2Q08999 1139 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 RAD51AP2Q09MP3 1159 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 DPYDQ12882 1025 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 IL17AQ16552 155 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 KIAA0825Q8IV33 1275 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 NELFBQ8WX92 580 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 ATRIPQ8WXE1 791 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 FERMT2Q96AC1 680 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 LEMD3Q9Y2U8 911 aa9.85□□□□□ -0.83
UBE3B-208ENST00000538070 CALML3P27482 149 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 CASP14P31944 242 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 PPP2R5BQ15173 497 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 DYMQ7RTS9 669 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 CCDC12Q8WUD4 166 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-208ENST00000538070 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 CCDC94Q9BW85 323 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-208ENST00000538070 PPP2R2CQ9Y2T4 447 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.84□□□□□ -0.83
UBE3B-208ENST00000538070 TPM1P09493 284 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 GYS1P13807 737 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 RASA1P20936 1047 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 ASIC1P78348 528 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 NPY5RQ15761 445 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 ZMYND15Q9H091 742 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 RNF216Q9NWF9 866 aaPredicted RBP9.84□□□□□ -0.83
UBE3B-208ENST00000538070 FAM170AA1A519 330 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 UBXN1Q04323 297 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 RC3H1Q5TC82 1133 aaKnown RBP9.84□□□□□ -0.83
UBE3B-208ENST00000538070 KCTD1Q719H9 257 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 MTERF4Q7Z6M4 381 aaKnown RBP9.84□□□□□ -0.83
UBE3B-208ENST00000538070 ANKRD20A12PQ8NF67 263 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 KCNQ5Q9NR82 932 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 USP40Q9NVE5 1235 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 MAD2L2Q9UI95 211 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 PCDHA4Q9UN74 947 aa9.84□□□□□ -0.83
UBE3B-208ENST00000538070 MYH13Q9UKX3 1938 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 NHSL1Q5SYE7 1610 aa9.83□□□□□ -0.84
UBE3B-208ENST00000538070 AKR1B15C9JRZ8 316 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms