RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 EZH1Q92800 747 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 DTNBP1Q96EV8 351 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 SMIM24O75264 130 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 CWF19L1Q69YN2 538 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 HAUS2Q9NVX0 235 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 DACH1Q9UI36 760 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 FAM184BQ9ULE4 1060 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 LIN7AO14910 233 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 YY1P25490 414 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 KIF5BP33176 963 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 THEMIS2Q5TEJ8 643 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 MYSM1Q5VVJ2 828 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 SND1Q7KZF4 910 aaKnown RBP eCLIP12.14□□□□□ -0.473e-7■■■□□ 16
CLSTN3-207ENST00000537408 TMEM139Q8IV31 216 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 NOA1Q8NC60 698 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 KCNG4Q8TDN1 519 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 SH3GL2Q99962 352 aa12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-207ENST00000537408 MAFGO15525 162 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 NCAPHQ15003 741 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 ALS2CLQ60I27 953 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 TTLL7Q6ZT98 887 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 DPF2Q92785 391 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 P3H4Q92791 437 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 FSD1Q9BTV5 496 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 SLC39A2Q9NP94 309 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 TBC1D25Q3MII6 688 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 BZW1Q7L1Q6 419 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 ARHGAP22Q7Z5H3 698 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 PANX2Q96RD6 677 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 USP28Q96RU2 1077 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 NOP53Q9NZM5 478 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 SRP68Q9UHB9 627 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 STRCP1A6NGW2 1772 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 TMEM232C9JQI7 657 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 GLRX3O76003 335 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 NLRP14Q86W24 1093 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 ARFGAP2Q8N6H7 521 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 PAPOLBQ9NRJ5 636 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
CLSTN3-207ENST00000537408 ADCY9O60503 1353 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 KRT32Q14532 448 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 SETDB1Q15047 1291 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 CNTNAP4Q9C0A0 1308 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 ATP1A2P50993 1020 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 APBA1Q02410 837 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 AACSQ86V21 672 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 FAM81AQ8TBF8 368 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 CUL5Q93034 780 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 E7EVH7 732 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 PYGLP06737 847 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 APLFQ8IW19 511 aaPredicted RBP12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 OGFOD1Q8N543 542 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 TC2NQ8N9U0 490 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 PLBD2Q8NHP8 589 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 CEP126Q9P2H0 1117 aa12.12□□□□□ -0.47
CLSTN3-207ENST00000537408 LSP1P33241 339 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 EIF4A1P60842 406 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 RRP12Q5JTH9 1297 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 GPBP1L1Q9HC44 474 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 GJA3Q9Y6H8 435 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 NHSL1Q5SYE7 1610 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 JAK2O60674 1132 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 NDUFA8P51970 172 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 UBE3BQ7Z3V4 1068 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 C15orf41Q9Y2V0 281 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 CD2APQ9Y5K6 639 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 CUL3Q13618 768 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 WASHC4Q2M389 1173 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 ARMC3Q5W041 872 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 NCAPH2Q6IBW4 605 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 SDCCAG8Q86SQ7 713 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 CCT8L2Q96SF2 557 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 PCDHA7Q9UN72 937 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 GOLGA6L10A0A0M3HER8 536 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 PTH1RQ03431 593 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 HMG20BQ9P0W2 317 aa12.11□□□□□ -0.47
CLSTN3-207ENST00000537408 COL15A1P39059 1388 aa12.1□□□□□ -0.47
CLSTN3-207ENST00000537408 SOWAHDA6NJG2 315 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms