RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 BLIDQ8IZY5 108 aa10.63□□□□□ -0.71
UBE3B-207ENST00000537063 SMARCE1Q969G3 411 aa10.63□□□□□ -0.71
UBE3B-207ENST00000537063 BAZ2BQ9UIF8 2168 aaKnown RBP10.62□□□□□ -0.71
UBE3B-207ENST00000537063 ATP1A3P13637 1013 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 TYW1BQ6NUM6 668 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 ZNF444Q8N0Y2 327 aaPredicted RBP10.62□□□□□ -0.71
UBE3B-207ENST00000537063 ENOX1Q8TC92 643 aaKnown RBP10.62□□□□□ -0.71
UBE3B-207ENST00000537063 EPSTI1Q96J88 318 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 SAP30BPQ9UHR5 308 aaKnown RBP10.62□□□□□ -0.71
UBE3B-207ENST00000537063 DACH1Q9UI36 760 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 STXBP3O00186 592 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 GABPAQ06546 454 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 PTGDRQ13258 359 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 IL17AQ16552 155 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 SLC4A8Q2Y0W8 1093 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 WWC2Q6AWC2 1192 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 PIK3AP1Q6ZUJ8 805 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 MYO3BQ8WXR4 1341 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 NPR1P16066 1061 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 DPYDQ12882 1025 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 ZNF174Q15697 407 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 ISM2Q6H9L7 571 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 ARMCX5Q6P1M9 558 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 PAGE5Q96GU1 130 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 MED15Q96RN5 788 aa10.62□□□□□ -0.71
UBE3B-207ENST00000537063 IGKV6D-41A0A0C4DH26 115 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 CBFA2T2O43439 604 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 SMC2O95347 1197 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 ERCC5P28715 1186 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-207ENST00000537063 LMOD1P29536 600 aaPredicted RBP10.61□□□□□ -0.71
UBE3B-207ENST00000537063 GRAMD1CQ8IYS0 662 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 NLGN1Q8N2Q7 840 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 CCDC148Q8NFR7 591 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 EYA3Q99504 573 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 PYM1Q9BRP8 204 aaKnown RBP10.61□□□□□ -0.71
UBE3B-207ENST00000537063 SKILP12757 684 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 ATP2B1P20020 1258 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 FMR1Q06787 632 aaKnown RBP eCLIP10.61□□□□□ -0.71
UBE3B-207ENST00000537063 DNTTIP2Q5QJE6 756 aaKnown RBP10.61□□□□□ -0.71
UBE3B-207ENST00000537063 PDXDC2PQ6P474 469 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
UBE3B-207ENST00000537063 COL23A1Q86Y22 540 aaPredicted RBP10.6□□□□□ -0.71
UBE3B-207ENST00000537063 VSTM4Q8IW00 320 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 CERS5Q8N5B7 392 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 DPF2Q92785 391 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 GPKOWQ92917 476 aaPredicted RBP eCLIP10.6□□□□□ -0.71
UBE3B-207ENST00000537063 INTS13Q9NVM9 706 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 FANCLQ9NW38 375 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 PCDHA6Q9UN73 950 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 PCDHA8Q9Y5H6 950 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 TOP1P11387 765 aaKnown RBP10.6□□□□□ -0.71
UBE3B-207ENST00000537063 LONP1P36776 959 aaKnown RBP10.6□□□□□ -0.71
UBE3B-207ENST00000537063 FILIP1Q7Z7B0 1213 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 GSDMAQ96QA5 445 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 CUL4BQ13620 913 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 TMC6Q7Z403 805 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 DHX58Q96C10 678 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 ZMYND12Q9H0C1 365 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 PSME4Q14997 1843 aa10.6□□□□□ -0.71
UBE3B-207ENST00000537063 C6orf229H3BNL8 230 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 PDILTQ8N807 584 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 TMX1Q9H3N1 280 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 VWA3AA6NCI4 1184 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 SNHG28P0DPA3 235 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 UBASH3AP57075 661 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 GTF2IP78347 998 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 TBX2Q13207 712 aaPredicted RBP10.59□□□□□ -0.71
UBE3B-207ENST00000537063 FLAD1Q8NFF5 587 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 CEP95Q96GE4 821 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 MYH4Q9Y623 1939 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 ARFGEF1Q9Y6D6 1849 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 KLRF2D3W0D1 207 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 LAD1O00515 517 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 PRPHP41219 470 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 CCAR2Q8N163 923 aaKnown RBP10.59□□□□□ -0.71
UBE3B-207ENST00000537063 SCN9AQ15858 1988 aa10.59□□□□□ -0.71
UBE3B-207ENST00000537063 ESYT2A0FGR8 921 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 USP27XA6NNY8 438 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 hCG_1984214I3L0E3 225 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 PARP1P09874 1014 aaKnown RBP10.58□□□□□ -0.72
UBE3B-207ENST00000537063 ALDH1B1P30837 517 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 PDE6BP35913 854 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 HHIPL2Q6UWX4 724 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 ZNF713Q8N859 430 aaPredicted RBP10.58□□□□□ -0.72
UBE3B-207ENST00000537063 RIOX1Q9H6W3 641 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 STX8Q9UNK0 236 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 CTIFO43310 598 aaKnown RBP10.58□□□□□ -0.72
UBE3B-207ENST00000537063 MCM7P33993 719 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 APTXQ7Z2E3 356 aaKnown RBP10.58□□□□□ -0.72
UBE3B-207ENST00000537063 IQUBQ8NA54 791 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 MTRQ99707 1265 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 CD44P16070 742 aaKnown RBP10.58□□□□□ -0.72
UBE3B-207ENST00000537063 FKBP1AP62942 108 aaKnown RBP10.58□□□□□ -0.72
UBE3B-207ENST00000537063 ORC2Q13416 577 aaPredicted RBP10.58□□□□□ -0.72
UBE3B-207ENST00000537063 CDKAL1Q5VV42 579 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 RASGRP2Q7LDG7 609 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 MASTLQ96GX5 879 aa10.58□□□□□ -0.72
UBE3B-207ENST00000537063 DDX4Q9NQI0 724 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms