RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 IGKV5-2P06315 115 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 ZFYP08048 801 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 SNRPA1P09661 255 aaKnown RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 CCDC175P0C221 793 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 COL9A1P20849 921 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 TBX2Q13207 712 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 CRHR2Q13324 411 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 IMMTQ16891 758 aaKnown RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 LONRF2Q1L5Z9 754 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 WASHC4Q2M389 1173 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 PROSER3Q2NL68 480 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 AXDND1Q5T1B0 1012 aaPredicted RBP8.84□□□□□ -0.99
CPSF7-216ENST00000536548 SPRYD7Q5W111 196 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 TTLL7Q6ZT98 887 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 SRGAP1Q7Z6B7 1085 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 TRIML1Q8N9V2 468 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 MLKLQ8NB16 471 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 SH3TC2Q8TF17 1288 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 MYD88Q99836 296 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 DBNDD2Q9BQY9 259 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 FUT8Q9BYC5 575 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 PARD6BQ9BYG5 372 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 HPSEQ9Y251 543 aa8.84□□□□□ -0.99
CPSF7-216ENST00000536548 NEDD4P46934 1319 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 ZSWIM8A7E2V4 1837 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 SPEF2Q9C093 1822 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 KLF18A0A0U1RQI7 1052 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 GOLGA8BA8MQT2 603 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 MAP2K7O14733 419 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 KIF5CO60282 957 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 ECE2O60344 883 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 HSPD1P10809 573 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 FDPSP14324 419 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 MCM3P25205 808 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 USP5P45974 858 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 LMAN1P49257 510 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 AIMP1Q12904 312 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 HSP90B2PQ58FF3 399 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 SPECC1LQ69YQ0 1117 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 KANK3Q6NY19 840 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 DDX46Q7L014 1031 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 RALYLQ86SE5 291 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 SRLQ86TD4 932 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 MSANTD4Q8NCY6 345 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 SHISA4Q96DD7 197 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 EDC3Q96F86 508 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 PANX2Q96RD6 677 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 SEC62Q99442 399 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 FAM107BQ9H098 131 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 ZBTB3Q9H5J0 574 aa8.83□□□□□ -1
CPSF7-216ENST00000536548 NCOA5Q9HCD5 579 aaKnown RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.83□□□□□ -1
CPSF7-216ENST00000536548 ANKRD36CQ5JPF3 1778 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 A0A1B0GUL7 405 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 MYO1CO00159 1063 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 GOLIM4O00461 696 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 PRC1O43663 620 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 SASH3O75995 380 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 POLR3DP05423 398 aaPredicted RBP8.82□□□□□ -1
CPSF7-216ENST00000536548 VIL1P09327 827 aaKnown RBP8.82□□□□□ -1
CPSF7-216ENST00000536548 IL15P40933 162 aaPredicted RBP8.82□□□□□ -1
CPSF7-216ENST00000536548 CHMP4BP1P59074 171 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 ZNF280AP59817 542 aaPredicted RBP8.82□□□□□ -1
CPSF7-216ENST00000536548 SP3Q02447 781 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 TCIRG1Q13488 830 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 TRIM29Q14134 588 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 RESP18Q5W5W9 173 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 TMEM139Q8IV31 216 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 ZNF34Q8IZ26 560 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 PDILTQ8N807 584 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 CNNM3Q8NE01 707 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 NCOA7Q8NI08 942 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 FAM71BQ8TC56 605 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 ENOX1Q8TC92 643 aaKnown RBP8.82□□□□□ -1
CPSF7-216ENST00000536548 CCDC12Q8WUD4 166 aaPredicted RBP8.82□□□□□ -1
CPSF7-216ENST00000536548 KIFC2Q96AC6 838 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 CCDC51Q96ER9 411 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 YY1AP1Q9H869 796 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 MED4Q9NPJ6 270 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 MTMR10Q9NXD2 777 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 POLLQ9UGP5 575 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 CDC23Q9UJX2 597 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 ADAM21Q9UKJ8 722 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 RAB21Q9UL25 225 aa8.82□□□□□ -1
CPSF7-216ENST00000536548 RRP15Q9Y3B9 282 aaKnown RBP8.82□□□□□ -1
CPSF7-216ENST00000536548 MAST3O60307 1309 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 LRRC37AA6NMS7 1700 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 VGLL3A8MV65 326 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 ERVV-1B6SEH8 477 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 AKR1B15C9JRZ8 316 aaPredicted RBP8.81□□□□□ -1
CPSF7-216ENST00000536548 C6orf229H3BNL8 230 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 IFIT1P09914 478 aaKnown RBP8.81□□□□□ -1
CPSF7-216ENST00000536548 ATP1A3P13637 1013 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 ERCC5P28715 1186 aaPredicted RBP8.81□□□□□ -1
CPSF7-216ENST00000536548 PDIA6Q15084 440 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 MTFR1Q15390 333 aa8.81□□□□□ -1
CPSF7-216ENST00000536548 WHAMMP3Q1A5X7 153 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms