RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 ERCC3P19447 782 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 ADORA2AP29274 412 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 TMEM179Q6ZVK1 233 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 CLEC10AQ8IUN9 316 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 AMOTL1Q8IY63 956 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 MYH7P12883 1935 aa14.89□□□□□ -0.03
PRKDC-207ENST00000536483 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 DNM1LO00429 736 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 STRNO43815 780 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 CYBAP13498 195 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 AKR1B1P15121 316 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 DSG3P32926 999 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 CDK8P49336 464 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 GJC2Q5T442 439 aaPredicted RBP14.88□□□□□ -0.03
PRKDC-207ENST00000536483 ANO1Q5XXA6 986 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 CHD1LQ86WJ1 897 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 SIAH1Q8IUQ4 282 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 MTMR10Q9NXD2 777 aa14.88□□□□□ -0.03
PRKDC-207ENST00000536483 LAMA2P24043 3122 aaKnown RBP14.88□□□□□ -0.03
PRKDC-207ENST00000536483 FRMPD3Q5JV73 1810 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 COBLO75128 1261 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 FLOT1O75955 427 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 PLS1Q14651 629 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 OLFML2BQ68BL8 750 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
PRKDC-207ENST00000536483 NCAPG2Q86XI2 1143 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 SPICE1Q8N0Z3 855 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 SHCBP1Q8NEM2 672 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 ATG4CQ96DT6 458 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 LBHD1Q9BQE6 289 aaPredicted RBP14.87□□□□□ -0.03
PRKDC-207ENST00000536483 EPB41L4AQ9HCS5 686 aaPredicted RBP14.87□□□□□ -0.03
PRKDC-207ENST00000536483 STXBP5LQ9Y2K9 1186 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 TMX2Q9Y320 296 aa14.87□□□□□ -0.03
PRKDC-207ENST00000536483 CYP2D7A0A087X1C5 515 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 M0R2C6 588 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 RTP1P59025 263 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 ICA1Q05084 483 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 PRAMEF19Q5SWL8 479 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 PLEKHM2Q8IWE5 1019 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 MB21D1Q8N884 522 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 FSD1Q9BTV5 496 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 LNPKQ9C0E8 428 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 MROH8Q9H579 483 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 ARHGEF10LQ9HCE6 1279 aa14.86□□□□□ -0.03
PRKDC-207ENST00000536483 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
PRKDC-207ENST00000536483 IFNL3Q8IZI9 196 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 ARRDC4Q8NCT1 418 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 SEC62Q99442 399 aaKnown RBP14.85□□□□□ -0.03
PRKDC-207ENST00000536483 SH2D4AQ9H788 454 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 KANSL2Q9H9L4 492 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 HELLSQ9NRZ9 838 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 SLC5A4Q9NY91 659 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 PRKAG2Q9UGJ0 569 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 ATP11BQ9Y2G3 1177 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 RLFQ13129 1914 aa14.85□□□□□ -0.03
PRKDC-207ENST00000536483 UNC80Q8N2C7 3258 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 FOXP2O15409 715 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 SEPT4O43236 478 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 TMEM132BQ14DG7 1078 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 ALX1Q15699 326 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 SLC39A5Q6ZMH5 540 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 ABRAQ8N0Z2 381 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.84□□□□□ -0.03
PRKDC-207ENST00000536483 NACAP1Q9BZK3 213 aa14.84□□□□□ -0.03
PRKDC-207ENST00000536483 ZNF236Q9UL36 1845 aa14.83□□□□□ -0.04
PRKDC-207ENST00000536483 KBTBD13C9JR72 458 aa14.83□□□□□ -0.04
PRKDC-207ENST00000536483 WDR46O15213 610 aaKnown RBP14.83□□□□□ -0.04
PRKDC-207ENST00000536483 FCER1AP12319 257 aa14.83□□□□□ -0.04
PRKDC-207ENST00000536483 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
PRKDC-207ENST00000536483 RASA1P20936 1047 aa14.83□□□□□ -0.04
PRKDC-207ENST00000536483 MAML3Q96JK9 1138 aa14.83□□□□□ -0.04
PRKDC-207ENST00000536483 ZNF287Q9HBT7 754 aa14.83□□□□□ -0.04
PRKDC-207ENST00000536483 A0A0G2JMZ2 1700 aa14.83□□□□□ -0.04
PRKDC-207ENST00000536483 IGKV6D-41A0A0C4DH26 115 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 ADCYAP1R1P41586 468 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 TRIM60Q495X7 471 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 B4GALNT3Q6L9W6 998 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 FERMT2Q96AC1 680 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 FBXO28Q9NVF7 368 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 ANAPC4Q9UJX5 808 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 SYNPO2Q9UMS6 1093 aa14.82□□□□□ -0.04
PRKDC-207ENST00000536483 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
PRKDC-207ENST00000536483 CUL9Q8IWT3 2517 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 RAD21O60216 631 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 SLC25A27O95847 323 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 PGK2P07205 417 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 FGRP09769 529 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 TDO2P48775 406 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 LRRC41Q15345 812 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 MCMDC2Q4G0Z9 681 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 FAM47AQ5JRC9 791 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 MKL1Q969V6 931 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 FAM161BQ96MY7 647 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 MMP19Q99542 508 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 PRDM5Q9NQX1 630 aaPredicted RBP14.81□□□□□ -0.04
PRKDC-207ENST00000536483 NYAP2Q9P242 653 aa14.81□□□□□ -0.04
PRKDC-207ENST00000536483 ADAMTS5Q9UNA0 930 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms