RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 TPCN1Q9ULQ1 816 aa18.19■□□□□ 0.5
CNN1-202ENST00000535659 LIMCH1Q9UPQ0 1083 aa18.19■□□□□ 0.5
CNN1-202ENST00000535659 MYH4Q9Y623 1939 aa18.19■□□□□ 0.5
CNN1-202ENST00000535659 WDR46O15213 610 aaKnown RBP18.18■□□□□ 0.5
CNN1-202ENST00000535659 VEGFBP49765 207 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 RCAN1P53805 252 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 KIF23Q02241 960 aaPredicted RBP18.18■□□□□ 0.5
CNN1-202ENST00000535659 BRI3BPQ8WY22 251 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
CNN1-202ENST00000535659 WDR33Q9C0J8 1336 aaKnown RBP18.18■□□□□ 0.5
CNN1-202ENST00000535659 PARP1P09874 1014 aaKnown RBP18.18■□□□□ 0.5
CNN1-202ENST00000535659 MCM2P49736 904 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 ZNF543Q08ER8 600 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 GRM4Q14833 912 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 PPP2R5BQ15173 497 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 FAM83BQ5T0W9 1011 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 TREML2Q5T2D2 321 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 GPAT2Q6NUI2 795 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
CNN1-202ENST00000535659 RAB11FIP4Q86YS3 637 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 ZIC5Q96T25 663 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 PTPN18Q99952 460 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 RPAP3Q9H6T3 665 aaPredicted RBP18.18■□□□□ 0.5
CNN1-202ENST00000535659 AGTPBP1Q9UPW5 1226 aa18.18■□□□□ 0.5
CNN1-202ENST00000535659 PALM3A6NDB9 673 aaPredicted RBP18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L15C9J2P7 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L13C9JLJ4 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L11C9JVI0 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L18D6R9N7 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L22D6RA61 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L17D6RBQ6 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L19D6RCP7 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L20D6RJB6 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 AOC2O75106 756 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 GOLGA8HP0CJ92 632 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 RXRAP19793 462 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 HOXA7P31268 230 aaPredicted RBP18.17■□□□□ 0.5
CNN1-202ENST00000535659 KIF5BP33176 963 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 TM4SF4P48230 202 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 USP17L24Q0WX57 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 CCDC96Q2M329 555 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 ASPRV1Q53RT3 343 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 GPATCH4Q5T3I0 446 aaKnown RBP18.17■□□□□ 0.5
CNN1-202ENST00000535659 CATSPERGQ6ZRH7 1159 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 KCTD1Q719H9 257 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 RASGRP2Q7LDG7 609 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 MICU3Q86XE3 530 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
CNN1-202ENST00000535659 CTCFLQ8NI51 663 aaPredicted RBP18.17■□□□□ 0.5
CNN1-202ENST00000535659 ZSCAN31Q96LW9 406 aaPredicted RBP18.17■□□□□ 0.5
CNN1-202ENST00000535659 GPCPD1Q9NPB8 672 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 MAD2L2Q9UI95 211 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 HPS5Q9UPZ3 1129 aa18.17■□□□□ 0.5
CNN1-202ENST00000535659 GOLGA8BA8MQT2 603 aa18.16■□□□□ 0.5
CNN1-202ENST00000535659 BTBD19C9JJ37 291 aa18.16■□□□□ 0.5
CNN1-202ENST00000535659 TMEM232C9JQI7 657 aa18.16■□□□□ 0.5
CNN1-202ENST00000535659 CD2BP2O95400 341 aaKnown RBP18.16■□□□□ 0.5
CNN1-202ENST00000535659 HSPA1AP0DMV8 641 aaKnown RBP18.16■□□□□ 0.5
CNN1-202ENST00000535659 HSPA1BP0DMV9 641 aaKnown RBP18.16■□□□□ 0.5
CNN1-202ENST00000535659 MAP2K2P36507 400 aa18.16■□□□□ 0.5
CNN1-202ENST00000535659 METAP2P50579 478 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNN1-202ENST00000535659 SREBF2Q12772 1141 aa18.16■□□□□ 0.5
CNN1-202ENST00000535659 PABPC4Q13310 644 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNN1-202ENST00000535659 ANKRD23Q86SG2 305 aa18.16■□□□□ 0.5
CNN1-202ENST00000535659 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
CNN1-202ENST00000535659 ISY1Q9ULR0 285 aaKnown RBP18.16■□□□□ 0.5
CNN1-202ENST00000535659 FRMPD2Q68DX3 1309 aaPredicted RBP18.16■□□□□ 0.5
CNN1-202ENST00000535659 GOLGA8AA7E2F4 631 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 PLA2G6O60733 806 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 STK3Q13188 491 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 ME3Q16798 604 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 STAG2Q8N3U4 1231 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 CHURC1Q8WUH1 139 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 TANGO6Q9C0B7 1094 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
CNN1-202ENST00000535659 FEM1BQ9UK73 627 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 SLC45A1Q9Y2W3 748 aa18.15■□□□□ 0.5
CNN1-202ENST00000535659 CCDC196A0A1B0GTZ2 297 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 KLRF2D3W0D1 207 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 PFKFB2O60825 505 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 GNAQP50148 359 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 CCT2P78371 535 aaKnown RBP18.14■□□□□ 0.49
CNN1-202ENST00000535659 COG2Q14746 738 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 RTN1Q16799 776 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 OTUD7BQ6GQQ9 843 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 TTBK2Q6IQ55 1244 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 SNX21Q969T3 373 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 FAM217BQ9NTX9 383 aaPredicted RBP18.14■□□□□ 0.49
CNN1-202ENST00000535659 RBM28Q9NW13 759 aaKnown RBP18.14■□□□□ 0.49
CNN1-202ENST00000535659 HOXC10Q9NYD6 342 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 PTPRFP10586 1907 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 LOC285556D6RIA3 1793 aa18.14■□□□□ 0.49
CNN1-202ENST00000535659 PDHXO00330 501 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 FLOT1O75955 427 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 OSBPP22059 807 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 ADD1P35611 737 aaKnown RBP18.13■□□□□ 0.49
CNN1-202ENST00000535659 BTNL9Q6UXG8 535 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 FAM160B2Q86V87 743 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 IFNL1Q8IU54 200 aa18.13■□□□□ 0.49
CNN1-202ENST00000535659 FAM43AQ8N2R8 423 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms