RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 UIMC1Q96RL1 719 aa10.23□□□□□ -0.77
CLIP1-206ENST00000535290 TSEN34Q9BSV6 310 aaKnown RBP10.23□□□□□ -0.77
CLIP1-206ENST00000535290 IL23AQ9NPF7 189 aa10.23□□□□□ -0.77
CLIP1-206ENST00000535290 AATFQ9NY61 560 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLIP1-206ENST00000535290 SAP30BPQ9UHR5 308 aaKnown RBP10.23□□□□□ -0.77
CLIP1-206ENST00000535290 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
CLIP1-206ENST00000535290 COG5Q9UP83 839 aa10.23□□□□□ -0.77
CLIP1-206ENST00000535290 SALL2Q9Y467 1007 aaPredicted RBP10.23□□□□□ -0.77
CLIP1-206ENST00000535290 FLT1P17948 1338 aa10.23□□□□□ -0.77
CLIP1-206ENST00000535290 SIPA1L1O43166 1804 aa10.23□□□□□ -0.77
CLIP1-206ENST00000535290 BRWD1Q9NSI6 2320 aa10.23□□□□□ -0.77
CLIP1-206ENST00000535290 A0A1B0GUL7 405 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 MYADML2A6NDP7 307 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 FGBP02675 491 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 COG2Q14746 738 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 NCAPG2Q86XI2 1143 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 ABRAQ8N0Z2 381 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 SPATA5Q8NB90 893 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 HLA-CQ95604 372 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 FBXL18Q96ME1 805 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 CERS4Q9HA82 394 aa10.22□□□□□ -0.77
CLIP1-206ENST00000535290 ZDBF2Q9HCK1 2354 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 MOXD2PA6NHM9 499 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 GTPBP6O43824 516 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-206ENST00000535290 PGK2P07205 417 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 AKR1A1P14550 325 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 PPP4CP60510 307 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 PLS1Q14651 629 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 CCDC184Q52MB2 194 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 TATDN1Q6P1N9 297 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 ADGRA1Q86SQ6 560 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 WDR63Q8IWG1 891 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 FAM126BQ8IXS8 530 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 TINF2Q9BSI4 451 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 MTIF3Q9H2K0 278 aaKnown RBP10.21□□□□□ -0.77
CLIP1-206ENST00000535290 MROH8Q9H579 483 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 HOXC10Q9NYD6 342 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 PCDHA11Q9Y5I1 949 aa10.21□□□□□ -0.77
CLIP1-206ENST00000535290 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-206ENST00000535290 ELP1O95163 1332 aa10.21□□□□□ -0.78
CLIP1-206ENST00000535290 SYNRGQ9UMZ2 1314 aa10.21□□□□□ -0.78
CLIP1-206ENST00000535290 ARVCFO00192 962 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 BAG3O95817 575 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 FCER1AP12319 257 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 PLCG2P16885 1265 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 MVPQ14764 893 aaKnown RBP10.2□□□□□ -0.78
CLIP1-206ENST00000535290 UMODL1Q5DID0 1318 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 MROH7Q68CQ1 1323 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 VTI1AQ96AJ9 217 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 ROBO3Q96MS0 1386 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 GLT1D1Q96MS3 346 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 NOL10Q9BSC4 688 aaKnown RBP10.2□□□□□ -0.78
CLIP1-206ENST00000535290 LRP2BPQ9P2M1 347 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 SLC4A7Q9Y6M7 1214 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 REV3LO60673 3130 aa10.2□□□□□ -0.78
CLIP1-206ENST00000535290 ZNF236Q9UL36 1845 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 A0A1W2PRG0 241 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 HLA-DOAP06340 250 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 CA3P07451 260 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 GUCY1A2P33402 732 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 EVX2Q03828 476 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 TFCP2Q12800 502 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 ABCB5Q2M3G0 1257 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 ZNF792Q3KQV3 632 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 KIAA1755Q5JYT7 1200 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 NAA16Q6N069 864 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-206ENST00000535290 ATF7IPQ6VMQ6 1270 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 GJD3Q8N144 294 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 MRPL50Q8N5N7 158 aaKnown RBP10.19□□□□□ -0.78
CLIP1-206ENST00000535290 ANKS1AQ92625 1134 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 VWCEQ96DN2 955 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 PHOX2BQ99453 314 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 TANGO6Q9C0B7 1094 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 COPRSQ9NQ92 184 aa10.19□□□□□ -0.78
CLIP1-206ENST00000535290 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-206ENST00000535290 ARHGEF15O94989 841 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 CD4P01730 458 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 ASGR1P07306 291 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 ATP2A2P16615 1042 aaKnown RBP10.18□□□□□ -0.78
CLIP1-206ENST00000535290 MCAMP43121 646 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 CCL23P55773 120 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 DYNLL1P63167 89 aaKnown RBP10.18□□□□□ -0.78
CLIP1-206ENST00000535290 CERKLQ49MI3 558 aaPredicted RBP10.18□□□□□ -0.78
CLIP1-206ENST00000535290 MB21D1Q8N884 522 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 ARNTL2Q8WYA1 636 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 ATG4CQ96DT6 458 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 NEUROD6Q96NK8 337 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 MMP19Q99542 508 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 HIPK3Q9H422 1215 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 CNPY2Q9Y2B0 182 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 LRRC37A2A6NM11 1700 aa10.18□□□□□ -0.78
CLIP1-206ENST00000535290 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
CLIP1-206ENST00000535290 ADCY6O43306 1168 aa10.17□□□□□ -0.78
CLIP1-206ENST00000535290 SNAI1O95863 264 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-206ENST00000535290 C6orf222P0C671 652 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-206ENST00000535290 CST5P28325 142 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-206ENST00000535290 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-206ENST00000535290 SHMT1P34896 483 aa10.17□□□□□ -0.78
CLIP1-206ENST00000535290 TMEM132BQ14DG7 1078 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms