RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 EIF4A1P60842 406 aaKnown RBP20.05■□□□□ 0.8
SFSWAP-203ENST00000535236 XKR9Q5GH70 373 aa20.05■□□□□ 0.8
SFSWAP-203ENST00000535236 RSAD2Q8WXG1 361 aa20.05■□□□□ 0.8
SFSWAP-203ENST00000535236 NDUFAB1O14561 156 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 ARHGAP6O43182 974 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 SORBS3O60504 671 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 CDC37L1Q7L3B6 337 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 TRIM50Q86XT4 487 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 U2AF1L4Q8WU68 220 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 DDX17Q92841 729 aaKnown RBP20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 CARD6Q9BX69 1037 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 SERTAD1Q9UHV2 236 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 ANKRD35Q8N283 1001 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 ATP2A3Q93084 1043 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 NUF2Q9BZD4 464 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 MTMR3Q13615 1198 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 CERKLQ49MI3 558 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 RBSNQ9H1K0 784 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 OGFRQ9NZT2 677 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 SEPT6Q14141 434 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 ARHGAP27Q6ZUM4 889 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 SND1Q7KZF4 910 aaKnown RBP eCLIP20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 VSIG1Q86XK7 387 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 MMS19Q96T76 1030 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 PLCB1Q9NQ66 1216 aa20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 FEZ2Q9UHY8 353 aaPredicted RBP20.04■□□□□ 0.8
SFSWAP-203ENST00000535236 H0YCG3 227 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 JAK2O60674 1132 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 MTX1Q13505 466 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 LONRF2Q1L5Z9 754 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 SEPT14Q6ZU15 432 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 TRMT44Q8IYL2 757 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 SLFN12Q8IYM2 578 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 BLIDQ8IZY5 108 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 AMFRQ9UKV5 643 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 STAT1P42224 750 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 SCYL2Q6P3W7 929 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 NCAPG2Q86XI2 1143 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 MYOCDQ8IZQ8 938 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 IFIH1Q9BYX4 1025 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 RAB20Q9NX57 234 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 NUP153P49790 1475 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 SCNN1DP51172 638 aa20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 SARNPP82979 210 aaKnown RBP20.03■□□□□ 0.8
SFSWAP-203ENST00000535236 ARHGEF2Q92974 986 aaKnown RBP20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 PARP2Q9UGN5 583 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 K7ENM7 598 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 STAM2O75886 525 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 DOK7Q18PE1 504 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 SULF1Q8IWU6 871 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 GOLGA5Q8TBA6 731 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 PNMA2Q9UL42 364 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 GYG1P46976 350 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 FBXO11Q86XK2 927 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 KIAA0825Q8IV33 1275 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 ARHGAP24Q8N264 748 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 TEKT3Q9BXF9 490 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 PTPRKQ15262 1439 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 SPDYE16A6NNV3 312 aaPredicted RBP20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 TECP42680 631 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 PNOCQ13519 176 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 SPDYE2Q495Y8 402 aa20.02■□□□□ 0.8
SFSWAP-203ENST00000535236 A6NNZ2 444 aa20.02■□□□□ 0.79
SFSWAP-203ENST00000535236 CASQ2O14958 399 aaPredicted RBP20.02■□□□□ 0.79
SFSWAP-203ENST00000535236 TUBB8Q3ZCM7 444 aa20.02■□□□□ 0.79
SFSWAP-203ENST00000535236 HGSO14964 777 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 HADHQ16836 314 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 LRRC47Q8N1G4 583 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 C1orf112Q9NSG2 853 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 IFNL3Q8IZI9 196 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 P3H4Q92791 437 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 RAB17Q9H0T7 212 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 PCDHA12Q9UN75 941 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 N4BP1O75113 896 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 GBP1P32455 592 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 ICA1Q05084 483 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 CTAGE3PQ8IX95 158 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 SUGCTQ9HAC7 445 aa20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 RAB3IPQ96QF0 476 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-203ENST00000535236 BTDP43251 543 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 PLCB4Q15147 1175 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 PALM2Q8IXS6 379 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 HESX1Q9UBX0 185 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 DENND2CQ68D51 928 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 PDZD4Q76G19 769 aaPredicted RBP20■□□□□ 0.79
SFSWAP-203ENST00000535236 ITKQ08881 620 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 IFRD2Q12894 506 aaPredicted RBP20■□□□□ 0.79
SFSWAP-203ENST00000535236 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
SFSWAP-203ENST00000535236 TMOD1P28289 359 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 PNMA1Q8ND90 353 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 CNKSR1Q969H4 720 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 NBPF3Q9H094 633 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 VCXQ9H320 206 aa20■□□□□ 0.79
SFSWAP-203ENST00000535236 FAM170AA1A519 330 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 ABCB4P21439 1286 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 SESTD1Q86VW0 696 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 NRBP2Q9NSY0 501 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 TRIM35Q9UPQ4 493 aa19.99■□□□□ 0.79
SFSWAP-203ENST00000535236 PCK1P35558 622 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms