RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 YDJCA8MPS7 323 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 SFPQP23246 707 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3B2-216ENST00000534765 ANKRD1Q15327 319 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 JAKMIP3Q5VZ66 844 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 USP17L1Q7RTZ2 530 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 GOLPH3LQ9H4A5 285 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 CCDC144BQ3MJ40 725 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 MFSD14BQ5SR56 506 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 NLGN1Q8N2Q7 840 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 NOC3LQ8WTT2 800 aaKnown RBP10.25□□□□□ -0.77
SF3B2-216ENST00000534765 USP28Q96RU2 1077 aa10.25□□□□□ -0.77
SF3B2-216ENST00000534765 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.25□□□□□ -0.77
SF3B2-216ENST00000534765 TNKSO95271 1327 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 FGRP09769 529 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 FUT2Q10981 343 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 TMEM67Q5HYA8 995 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 C15orf52Q6ZUT6 534 aaKnown RBP10.24□□□□□ -0.77
SF3B2-216ENST00000534765 ANAPC4Q9UJX5 808 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 POLR3DP05423 398 aaPredicted RBP10.24□□□□□ -0.77
SF3B2-216ENST00000534765 CDR1P51861 262 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 NFIAQ12857 509 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 MFSD6Q6ZSS7 791 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 SP8Q8IXZ3 490 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 TMEM87AQ8NBN3 555 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 FAN1Q9Y2M0 1017 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 CLIC4Q9Y696 253 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 SHTN1A0MZ66 631 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
SF3B2-216ENST00000534765 GBP2P32456 591 aaPredicted RBP10.24□□□□□ -0.77
SF3B2-216ENST00000534765 C2CD5Q86YS7 1000 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
SF3B2-216ENST00000534765 PUF60Q9UHX1 559 aaKnown RBP10.24□□□□□ -0.77
SF3B2-216ENST00000534765 FAM196BA6NMK8 535 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 IFIT3O14879 490 aaKnown RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 BBOX1O75936 387 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 BTDP43251 543 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 GNG11P61952 73 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 KCNJ14Q9UNX9 436 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 CEP350Q5VT06 3117 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 PDS5AQ29RF7 1337 aaKnown RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 ATP2C2O75185 946 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 LDHBP07195 334 aaKnown RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 AOC3Q16853 763 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 RALYLQ86SE5 291 aaKnown RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 TADA2BQ86TJ2 420 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 SGMS1Q86VZ5 419 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 MCM9Q9NXL9 1143 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 BRCA1P38398 1863 aaKnown RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 SKAP2O75563 359 aaPredicted RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 ZBTB7AO95365 584 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 PRELPP51888 382 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 PKN1Q16512 942 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 CDAN1Q8IWY9 1227 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 LEO1Q8WVC0 666 aaPredicted RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 SCLT1Q96NL6 688 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 FAM107BQ9H098 131 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 VEZTQ9HBM0 779 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.23□□□□□ -0.77
SF3B2-216ENST00000534765 CAPN7Q9Y6W3 813 aa10.23□□□□□ -0.77
SF3B2-216ENST00000534765 MROH7-TTC4A0A0A0MT08 1334 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 CCDC196A0A1B0GTZ2 297 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 C21orf2O43822 256 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 RPSAP08865 295 aaKnown RBP10.22□□□□□ -0.77
SF3B2-216ENST00000534765 RHOXF2BP0C7M4 288 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 PAX7P23759 505 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 GRIN1Q05586 938 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 ARMC3Q5W041 872 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 DZIP1Q86YF9 867 aaKnown RBP10.22□□□□□ -0.77
SF3B2-216ENST00000534765 LRRC8AQ8IWT6 810 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 STAG2Q8N3U4 1231 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 RHOXF2Q9BQY4 288 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 BIN2Q9UBW5 565 aaPredicted RBP10.22□□□□□ -0.77
SF3B2-216ENST00000534765 PARP3Q9Y6F1 533 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 NR1I2O75469 434 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 KRT85P78386 507 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 JAG1P78504 1218 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 TROAPQ12815 778 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 KIF13BQ9NQT8 1826 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 SEMA3EO15041 775 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 NPR1P16066 1061 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 CCT5P48643 541 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 METAP2P50579 478 aaKnown RBP eCLIP10.22□□□□□ -0.77
SF3B2-216ENST00000534765 PSMD2Q13200 908 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 NPY5RQ15761 445 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 C12orf60Q5U649 245 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 SPATA32Q96LK8 384 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 GDAP1L1Q96MZ0 367 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 G3BP2Q9UN86 482 aaKnown RBP10.22□□□□□ -0.77
SF3B2-216ENST00000534765 FLT1P17948 1338 aa10.22□□□□□ -0.77
SF3B2-216ENST00000534765 EBAG9O00559 213 aa10.21□□□□□ -0.77
SF3B2-216ENST00000534765 PPP1R12AO14974 1030 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-216ENST00000534765 CAND2O75155 1236 aa10.21□□□□□ -0.77
SF3B2-216ENST00000534765 WDHD1O75717 1129 aaPredicted RBP10.21□□□□□ -0.77
SF3B2-216ENST00000534765 ATP2B4P23634 1241 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms