RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 MYH6P13533 1939 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 hCG_1642624A0A1W2PR95 340 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 USP17L5A8MUK1 530 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 ADM5C9JUS6 153 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 CDKL5O76039 1030 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 SNHG28P0DPA3 235 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 ZSCAN22P10073 491 aaPredicted RBP11.68□□□□□ -0.54
RPS3-219ENST00000534440 PDHBP11177 359 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 EEF2P13639 858 aaKnown RBP11.68□□□□□ -0.54
RPS3-219ENST00000534440 OTUD7BQ6GQQ9 843 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 CCDC84Q86UT8 332 aaPredicted RBP11.68□□□□□ -0.54
RPS3-219ENST00000534440 FAM184AQ8NB25 1140 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 CTCFLQ8NI51 663 aaPredicted RBP11.68□□□□□ -0.54
RPS3-219ENST00000534440 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 CPVLQ9H3G5 476 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 RBM28Q9NW13 759 aaKnown RBP11.68□□□□□ -0.54
RPS3-219ENST00000534440 NYAP2Q9P242 653 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 FZD1Q9UP38 647 aa11.68□□□□□ -0.54
RPS3-219ENST00000534440 FRMPD2Q68DX3 1309 aaPredicted RBP11.67□□□□□ -0.54
RPS3-219ENST00000534440 MYH15Q9Y2K3 1946 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 CCDC196A0A1B0GTZ2 297 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 A0A1W2PRG0 241 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 PALM3A6NDB9 673 aaPredicted RBP11.67□□□□□ -0.54
RPS3-219ENST00000534440 CCDC85CA6NKD9 419 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 FAM155AB1AL88 458 aaPredicted RBP11.67□□□□□ -0.54
RPS3-219ENST00000534440 CYTH3O43739 400 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 F13A1P00488 732 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 PDCP20941 246 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 ATP2B2Q01814 1243 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 GUCY1B3Q02153 619 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 RESTQ13127 1097 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 PKN1Q16512 942 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 CPLX2Q6PUV4 134 aaKnown RBP11.67□□□□□ -0.54
RPS3-219ENST00000534440 USP17L2Q6R6M4 530 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 ACER1Q8TDN7 264 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 ALG1Q9BT22 464 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 MCOLN1Q9GZU1 580 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
RPS3-219ENST00000534440 BAG4O95429 457 aaKnown RBP11.66□□□□□ -0.54
RPS3-219ENST00000534440 INPP5BP32019 993 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 KIF5BP33176 963 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 CAP2P40123 477 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 SSRP1Q08945 709 aaKnown RBP11.66□□□□□ -0.54
RPS3-219ENST00000534440 NOGQ13253 232 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 PPP2R5BQ15173 497 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 NFKBIBQ15653 356 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 CLEC17AQ6ZS10 378 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 MKL1Q969V6 931 aa11.66□□□□□ -0.54
RPS3-219ENST00000534440 RNF26Q9BY78 433 aaPredicted RBP11.66□□□□□ -0.54
RPS3-219ENST00000534440 PHIPQ8WWQ0 1821 aa11.65□□□□□ -0.54
RPS3-219ENST00000534440 PRPF3O43395 683 aaKnown RBP11.65□□□□□ -0.54
RPS3-219ENST00000534440 MLLT1Q03111 559 aaPredicted RBP11.65□□□□□ -0.54
RPS3-219ENST00000534440 ZNF543Q08ER8 600 aa11.65□□□□□ -0.54
RPS3-219ENST00000534440 FOXD4L6Q3SYB3 417 aaPredicted RBP11.65□□□□□ -0.54
RPS3-219ENST00000534440 FOXD4L3Q6VB84 417 aaPredicted RBP11.65□□□□□ -0.54
RPS3-219ENST00000534440 C8orf76Q96K31 380 aa11.65□□□□□ -0.54
RPS3-219ENST00000534440 ZNF408Q9H9D4 720 aa11.65□□□□□ -0.54
RPS3-219ENST00000534440 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
RPS3-219ENST00000534440 ZNF112Q9UJU3 913 aa11.65□□□□□ -0.54
RPS3-219ENST00000534440 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.54
RPS3-219ENST00000534440 KIF28PB7ZC32 967 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 KLRF2D3W0D1 207 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 H3BQV1 296 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 DEXIO95424 95 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 NDUFB10O96000 172 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 PARP1P09874 1014 aaKnown RBP11.64□□□□□ -0.55
RPS3-219ENST00000534440 MCM4P33991 863 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 HUNKP57058 714 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 ASPRV1Q53RT3 343 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 KRT40Q6A162 431 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 TRIM22Q8IYM9 498 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 GMCL1P1Q8NEA9 526 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 FBXO18Q8NFZ0 1043 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 DCPSQ96C86 337 aaKnown RBP11.64□□□□□ -0.55
RPS3-219ENST00000534440 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
RPS3-219ENST00000534440 SPZ1Q9BXG8 430 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 ZNF341Q9BYN7 854 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 GPCPD1Q9NPB8 672 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 KIF3AQ9Y496 699 aa11.64□□□□□ -0.55
RPS3-219ENST00000534440 V9GY48 417 aaPredicted RBP11.64□□□□□ -0.55
RPS3-219ENST00000534440 F5H6K3 240 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 ASNSP08243 561 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 GNAQP50148 359 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 KIF23Q02241 960 aaPredicted RBP11.63□□□□□ -0.55
RPS3-219ENST00000534440 KLRC3Q07444 240 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 NPY5RQ15761 445 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 CCDC96Q2M329 555 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 DCAF15Q66K64 600 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 TYW1BQ6NUM6 668 aa11.63□□□□□ -0.55
RPS3-219ENST00000534440 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms