RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
CTSC-209ENST00000534131 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 AGTPBP1Q9UPW5 1226 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
CTSC-209ENST00000534131 TESPA1A2RU30 521 aaPredicted RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 AOC2O75106 756 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 BMP3P12645 472 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 TM4SF4P48230 202 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 CTCFP49711 727 aaPredicted RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 IRX3P78415 501 aaPredicted RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 IKQ13123 557 aaPredicted RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 CCDC96Q2M329 555 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 ANKRD23Q86SG2 305 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 FBXL16Q8N461 479 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 CTCFLQ8NI51 663 aaPredicted RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 CHURC1Q8WUH1 139 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 BRF1Q92994 677 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 TCEANC2Q96MN5 208 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 TANGO6Q9C0B7 1094 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 ALDH8A1Q9H2A2 487 aaPredicted RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 ZCCHC17Q9NP64 241 aaKnown RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 SLC45A1Q9Y2W3 748 aa13.79□□□□□ -0.2
CTSC-209ENST00000534131 CTDP1Q9Y5B0 961 aaPredicted RBP13.79□□□□□ -0.2
CTSC-209ENST00000534131 DDAH1O94760 285 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 NDUFB10O96000 172 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 PARP1P09874 1014 aaKnown RBP13.78□□□□□ -0.2
CTSC-209ENST00000534131 KIF5BP33176 963 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
CTSC-209ENST00000534131 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 SPICE1Q8N0Z3 855 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 NKX2-3Q8TAU0 364 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 NUP133Q8WUM0 1156 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 MAP3K14Q99558 947 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 RPAP3Q9H6T3 665 aaPredicted RBP13.78□□□□□ -0.2
CTSC-209ENST00000534131 FEM1BQ9UK73 627 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 PARP14Q460N5 1801 aa13.78□□□□□ -0.2
CTSC-209ENST00000534131 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 BTBD19C9JJ37 291 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 ZBTB43O43298 467 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 VCAM1P19320 739 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 HOXA7P31268 230 aaPredicted RBP13.77□□□□□ -0.21
CTSC-209ENST00000534131 GNAQP50148 359 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 LBX1P52954 281 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 PPP2R5BQ15173 497 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 ASPRV1Q53RT3 343 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 FAM83BQ5T0W9 1011 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 FAM160B2Q86V87 743 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 IFNL1Q8IU54 200 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 GTF3C2Q8WUA4 911 aaPredicted RBP13.77□□□□□ -0.21
CTSC-209ENST00000534131 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 HOXC10Q9NYD6 342 aa13.77□□□□□ -0.21
CTSC-209ENST00000534131 CCDC196A0A1B0GTZ2 297 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 PDHXO00330 501 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 FLOT1O75955 427 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 PDHBP11177 359 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 MCM2P49736 904 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 STAT2P52630 851 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 RCAN1P53805 252 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 APOBRQ0VD83 1088 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 COG2Q14746 738 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 TAF1CQ15572 869 aaPredicted RBP13.76□□□□□ -0.21
CTSC-209ENST00000534131 CATSPERGQ6ZRH7 1159 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
CTSC-209ENST00000534131 AGXT2Q9BYV1 514 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 ZFYVE28Q9HCC9 887 aa13.76□□□□□ -0.21
CTSC-209ENST00000534131 RBM28Q9NW13 759 aaKnown RBP13.76□□□□□ -0.21
CTSC-209ENST00000534131 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
CTSC-209ENST00000534131 THSD7BQ9C0I4 1608 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 FDX1P10109 184 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 HSPA8P11142 646 aaKnown RBP13.75□□□□□ -0.21
CTSC-209ENST00000534131 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
CTSC-209ENST00000534131 AK2P54819 239 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 TREML2Q5T2D2 321 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 CPLX2Q6PUV4 134 aaKnown RBP13.75□□□□□ -0.21
CTSC-209ENST00000534131 APOA5Q6Q788 366 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 KCTD1Q719H9 257 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
CTSC-209ENST00000534131 PRPF38AQ8NAV1 312 aaKnown RBP13.75□□□□□ -0.21
CTSC-209ENST00000534131 SMCR8Q8TEV9 937 aaPredicted RBP13.75□□□□□ -0.21
CTSC-209ENST00000534131 ZNF274Q96GC6 653 aaPredicted RBP13.75□□□□□ -0.21
CTSC-209ENST00000534131 ZSCAN31Q96LW9 406 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms