RNA–Protein interactions for RNA: ENST00000533845.1

PDE4DIP-233, Transcript of phosphodiesterase 4D interacting protein, human

TSL 5

Gene PDE4DIP, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-233	ENST00000533845	CCL5	P13501	91 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	PTPRE	P23469	700 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	NT5C2	P49902	561 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	FAM83B	Q5T0W9	1011 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	CCAR1	Q8IX12	1150 aa	Known RBP	13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	TRMT44	Q8IYL2	757 aa	Known RBP	13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	REPS2	Q8NFH8	660 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	STAG1	Q8WVM7	1258 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	IL25	Q9H293	177 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	TCP11L1	Q9NUJ3	509 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	FBXO28	Q9NVF7	368 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845		A0A0G2JMZ2	1700 aa		13.53	□□□□□ -0.24
PDE4DIP-233	ENST00000533845	VWA5A	O00534	786 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	STRN	O43815	780 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	IGHA2	P01877	340 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	HMGCR	P04035	888 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	HOXC6	P09630	235 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CAPN2	P17655	700 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CYP2B6	P20813	491 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CHML	P26374	656 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RGS2	P41220	211 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	GJA8	P48165	433 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MAP2K5	Q13163	448 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	GRB14	Q14449	540 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	TMEM132B	Q14DG7	1078 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	AKNAD1	Q5T1N1	836 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MAP3K21	Q5TCX8	1036 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	NKX2-3	Q8TAU0	364 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	NUP88	Q99567	741 aa	Predicted RBP	13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	PAK6	Q9NQU5	681 aa	Predicted RBP	13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	BIN2	Q9UBW5	565 aa	Predicted RBP	13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RAD50	Q92878	1312 aa		13.52	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	KIAA0100	Q14667	2235 aa	Known RBP	13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	PARP14	Q460N5	1801 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	ZNF213	O14771	459 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RANBP6	O60518	1105 aa	Known RBP	13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	NMT2	O60551	498 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SLC25A27	O95847	323 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MYC	P01106	439 aa	Predicted RBP	13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	ERCC3	P19447	782 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	HAND2	P61296	217 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SLFN13	Q68D06	897 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MFSD6	Q6ZSS7	791 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	TBC1D10C	Q8IV04	446 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	ABRA	Q8N0Z2	381 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	PRPF38A	Q8NAV1	312 aa	Known RBP	13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	TRIB2	Q92519	343 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	GMCL1	Q96IK5	515 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	APBA2	Q99767	749 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SLF1	Q9BQI6	1058 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RNF208	Q9H0X6	261 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	UNC93B1	Q9H1C4	597 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RNF41	Q9H4P4	317 aa	Predicted RBP	13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MROH8	Q9H579	483 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CTNNA3	Q9UI47	895 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	FEM1B	Q9UK73	627 aa		13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	ZNF214	Q9UL59	606 aa	Predicted RBP	13.51	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	ATP2A1	O14983	1001 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	PLA2G6	O60733	806 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	BMP3	P12645	472 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RIOX2	Q8IUF8	465 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	LRRC47	Q8N1G4	583 aa	Known RBP	13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RUFY2	Q8WXA3	655 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SHISA4	Q96DD7	197 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	TTC14	Q96N46	770 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	IVNS1ABP	Q9Y6Y0	642 aa		13.5	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MKI67	P46013	3256 aa	Known RBP	13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RPTOR	Q8N122	1335 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RAD21	O60216	631 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SGPL1	O95470	568 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	STAT3	P40763	770 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	TRIM32	Q13049	653 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	UBE2Q1	Q7Z7E8	422 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CRISPLD2	Q9H0B8	497 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SLC38A10	Q9HBR0	1119 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	STX8	Q9UNK0	236 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MYH4	Q9Y623	1939 aa		13.49	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SGSM2	O43147	1006 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	FDX1	P10109	184 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	TOP1	P11387	765 aa	Known RBP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	ZKSCAN1	P17029	563 aa	Predicted RBP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	COPB2	P35606	906 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	SLC1A4	P43007	532 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	PLS1	Q14651	629 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CCL14	Q16627	93 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	IMMT	Q16891	758 aa	Known RBP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RRP12	Q5JTH9	1297 aa	Known RBP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	WDR78	Q5VTH9	848 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	RCSD1	Q6JBY9	416 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	NPLOC4	Q8TAT6	608 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	U2AF1L4	Q8WU68	220 aa	Known RBP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	ESR2	Q92731	530 aa		13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	CWC22	Q9HCG8	908 aa	Known RBP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	HMX1	Q9NP08	348 aa	Predicted RBP	13.48	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	NEDD4	P46934	1319 aa		13.47	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	COBL	O75128	1261 aa		13.47	□□□□□ -0.25
PDE4DIP-233	ENST00000533845	MCC	P23508	829 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms