RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SMCHD1A6NHR9 2005 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 EPG5Q9HCE0 2579 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 CD4P01730 458 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 ZNF865P0CJ78 1059 aaPredicted RBP13.13□□□□□ -0.31
CSDE1-215ENST00000533818 PHKA1P46020 1223 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 USP14P54578 494 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 MECOMQ03112 1051 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 FOXP4Q8IVH2 680 aaPredicted RBP13.13□□□□□ -0.31
CSDE1-215ENST00000533818 TINF2Q9BSI4 451 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 DHX36Q9H2U1 1008 aaKnown RBP13.13□□□□□ -0.31
CSDE1-215ENST00000533818 MROH8Q9H579 483 aa13.13□□□□□ -0.31
CSDE1-215ENST00000533818 ROBO3Q96MS0 1386 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 MYADML2A6NDP7 307 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 APAF1O14727 1248 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 ALDH1L1O75891 902 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 ASGR1P07306 291 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 FCER1AP12319 257 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 TTLL4Q14679 1199 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 PKN1Q16512 942 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 RABL6Q3YEC7 729 aaPredicted RBP13.12□□□□□ -0.31
CSDE1-215ENST00000533818 NCAPG2Q86XI2 1143 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 TEX11Q8IYF3 940 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
CSDE1-215ENST00000533818 ATOH1Q92858 354 aaPredicted RBP13.12□□□□□ -0.31
CSDE1-215ENST00000533818 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 RPAP3Q9H6T3 665 aaPredicted RBP13.12□□□□□ -0.31
CSDE1-215ENST00000533818 DNAJC18Q9H819 358 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 HOXC10Q9NYD6 342 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 CNPY2Q9Y2B0 182 aa13.12□□□□□ -0.31
CSDE1-215ENST00000533818 KIF28PB7ZC32 967 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 GH2P01242 217 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 LDHCP07864 332 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 NBPF7P0C2Y1 421 aaPredicted RBP13.11□□□□□ -0.31
CSDE1-215ENST00000533818 IRX5P78411 483 aaPredicted RBP13.11□□□□□ -0.31
CSDE1-215ENST00000533818 ZP2Q05996 745 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 PLS1Q14651 629 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 PBXIP1Q96AQ6 731 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
CSDE1-215ENST00000533818 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 IRF2BPLQ9H1B7 796 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 FAM184BQ9ULE4 1060 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
CSDE1-215ENST00000533818 MYH13Q9UKX3 1938 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 EYA2O00167 538 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 C6orf222P0C671 652 aaPredicted RBP13.1□□□□□ -0.31
CSDE1-215ENST00000533818 CST5P28325 142 aaPredicted RBP13.1□□□□□ -0.31
CSDE1-215ENST00000533818 COG2Q14746 738 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 ATP2B3Q16720 1220 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
CSDE1-215ENST00000533818 SUGP1Q8IWZ8 645 aaKnown RBP13.1□□□□□ -0.31
CSDE1-215ENST00000533818 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 ZNF384Q8TF68 577 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 GDPD5Q8WTR4 605 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 PRKAG3Q9UGI9 489 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 FAM50BQ9Y247 325 aa13.1□□□□□ -0.31
CSDE1-215ENST00000533818 H3BQ06 376 aaPredicted RBP13.09□□□□□ -0.31
CSDE1-215ENST00000533818 DUSP11O75319 330 aaKnown RBP13.09□□□□□ -0.31
CSDE1-215ENST00000533818 RGS20O76081 388 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 PGK2P07205 417 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 IRS1P35568 1242 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 GSTO1P78417 241 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 RASGRF1Q13972 1273 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 GNASQ5JWF2 1037 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 PHOSPHO2Q8TCD6 241 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 SCLYQ96I15 445 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 SLC9A7Q96T83 725 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 SPC25Q9HBM1 224 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 MUTYHQ9UIF7 546 aa13.09□□□□□ -0.31
CSDE1-215ENST00000533818 DCHS1Q96JQ0 3298 aa13.08□□□□□ -0.31
CSDE1-215ENST00000533818 HERC4Q5GLZ8 1057 aaPredicted RBP13.08□□□□□ -0.32
CSDE1-215ENST00000533818 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
CSDE1-215ENST00000533818 ASCL5Q7RTU5 278 aa13.08□□□□□ -0.32
CSDE1-215ENST00000533818 HERC6Q8IVU3 1022 aa13.08□□□□□ -0.32
CSDE1-215ENST00000533818 ADHFE1Q8IWW8 467 aa13.08□□□□□ -0.32
CSDE1-215ENST00000533818 SH3RF3Q8TEJ3 882 aaPredicted RBP13.08□□□□□ -0.32
CSDE1-215ENST00000533818 EDAQ92838 391 aa13.08□□□□□ -0.32
CSDE1-215ENST00000533818 TRPC6Q9Y210 931 aa13.08□□□□□ -0.32
CSDE1-215ENST00000533818 DIS3Q9Y2L1 958 aaKnown RBP13.08□□□□□ -0.32
CSDE1-215ENST00000533818 RIF1Q5UIP0 2472 aaKnown RBP13.08□□□□□ -0.32
CSDE1-215ENST00000533818 CACNA1HO95180 2353 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 CHD8Q9HCK8 2581 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 BAHCC1Q9P281 2608 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 SOWAHBA6NEL2 793 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 M0R296 226 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 PFKMP08237 780 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 ACTN1P12814 892 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 ZNF792Q3KQV3 632 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 DEFB128Q7Z7B8 93 aa13.07□□□□□ -0.32
CSDE1-215ENST00000533818 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms