RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 HOXC10Q9NYD6 342 aa19.29■□□□□ 0.68
PACSIN3-210ENST00000533686 MYPNQ86TC9 1320 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 ADGRA2Q96PE1 1338 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 MYH4Q9Y623 1939 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 TBC1D8O95759 1140 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 HSPA1AP0DMV8 641 aaKnown RBP19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 HSPA1BP0DMV9 641 aaKnown RBP19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 SNHG28P0DPA3 235 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 RPS6KB1P23443 525 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 LBX2Q6XYB7 198 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 FBXL16Q8N461 479 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 TANGO6Q9C0B7 1094 aa19.28■□□□□ 0.68
PACSIN3-210ENST00000533686 PLA2G6O60733 806 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 PDHBP11177 359 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 CASTP20810 708 aaKnown RBP19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 GCLCP48506 637 aaPredicted RBP19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 HERVK_113P62684 666 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 C17orf99Q6UX52 265 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 RUFY3Q7L099 469 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 SGMS1Q86VZ5 419 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 SMCR8Q8TEV9 937 aaPredicted RBP19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 NUP88Q99567 741 aaPredicted RBP19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 R3HDMLQ9H3Y0 253 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 UPF2Q9HAU5 1272 aaKnown RBP19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 FEM1BQ9UK73 627 aa19.27■□□□□ 0.68
PACSIN3-210ENST00000533686 FLOT1O75955 427 aa19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 DSG3P32926 999 aa19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 LRRC2Q9BYS8 371 aa19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 C22orf23Q9BZE7 217 aa19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 SENP2Q9HC62 589 aa19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 GPHNQ9NQX3 736 aaPredicted RBP19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 CYP46A1Q9Y6A2 500 aa19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 PCNTO95613 3336 aa19.26■□□□□ 0.67
PACSIN3-210ENST00000533686 SPDYE16A6NNV3 312 aaPredicted RBP19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 GPR25O00155 361 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 FOXN1O15353 648 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 BCRP11274 1271 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 GPATCH4Q5T3I0 446 aaKnown RBP19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 CATIPQ7Z7H3 387 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 FAM160B2Q86V87 743 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 CHURC1Q8WUH1 139 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 PPP1R9AQ9ULJ8 1098 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 ADAMTS5Q9UNA0 930 aa19.25■□□□□ 0.67
PACSIN3-210ENST00000533686 CCDC69A6NI79 296 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 TMEM232C9JQI7 657 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 CPA1P15085 419 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 CTCFP49711 727 aaPredicted RBP19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 STAT2P52630 851 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 ZNF543Q08ER8 600 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 TROAPQ12815 778 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 CCDC96Q2M329 555 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 BTNL9Q6UXG8 535 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 KCTD1Q719H9 257 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 MB21D1Q8N884 522 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 TCEANC2Q96MN5 208 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 MAP3K14Q99558 947 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 SLF1Q9BQI6 1058 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 AGXT2Q9BYV1 514 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 FBXO28Q9NVF7 368 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 MORF4L1Q9UBU8 362 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 MTMR7Q9Y216 660 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 RABGAP1Q9Y3P9 1069 aa19.24■□□□□ 0.67
PACSIN3-210ENST00000533686 DDAH1O94760 285 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 FDX1P10109 184 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 FAM110CQ1W6H9 321 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 ASPRV1Q53RT3 343 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 POTEEQ6S8J3 1075 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 NFXL1Q6ZNB6 911 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 Q6ZUG5 572 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 RASGRP2Q7LDG7 609 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 ZNF654Q8IZM8 581 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 RBPJLQ9UBG7 517 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 CPA4Q9UI42 421 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 TSKSQ9UJT2 592 aa19.23■□□□□ 0.67
PACSIN3-210ENST00000533686 PARP1P09874 1014 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 FGD1P98174 961 aa19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 SP3Q02447 781 aa19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 GRM4Q14833 912 aa19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 ATG4CQ96DT6 458 aa19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 UPF3BQ9BZI7 483 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 ALDH8A1Q9H2A2 487 aaPredicted RBP19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 ISY1Q9ULR0 285 aaKnown RBP19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 SLC12A7Q9Y666 1083 aa19.22■□□□□ 0.67
PACSIN3-210ENST00000533686 VWA5AO00534 786 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 FKTNO75072 461 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 CALM1P0DP23 149 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 CALM2P0DP24 149 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 CALM3P0DP25 149 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 RCAN1P53805 252 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 SYNE3Q6ZMZ3 975 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 ANKRD13CQ8N6S4 541 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 GPRC5AQ8NFJ5 357 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 CHMP4CQ96CF2 233 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 TXNRD2Q9NNW7 524 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 PDRG1Q9NUG6 133 aa19.21■□□□□ 0.67
PACSIN3-210ENST00000533686 FRMPD2Q68DX3 1309 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms