RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 PTGS1P23219 599 aa32.52■■■□□ 2.8
SAMD1-202ENST00000533683 CRKP46108 304 aa32.52■■■□□ 2.8
SAMD1-202ENST00000533683 ATP2C1P98194 919 aaPredicted RBP32.52■■■□□ 2.8
SAMD1-202ENST00000533683 OSBPL5Q9H0X9 879 aaPredicted RBP32.52■■■□□ 2.8
SAMD1-202ENST00000533683 BARHL2Q9NY43 387 aa32.52■■■□□ 2.8
SAMD1-202ENST00000533683 CLIP2Q9UDT6 1046 aa32.52■■■□□ 2.8
SAMD1-202ENST00000533683 NRBP1Q9UHY1 535 aa32.52■■■□□ 2.8
SAMD1-202ENST00000533683 HOOK1Q9UJC3 728 aaKnown RBP32.52■■■□□ 2.8
SAMD1-202ENST00000533683 HEATR3Q7Z4Q2 680 aa32.51■■■□□ 2.8
SAMD1-202ENST00000533683 EPSTI1Q96J88 318 aa32.51■■■□□ 2.8
SAMD1-202ENST00000533683 SERPINB13Q9UIV8 391 aa32.51■■■□□ 2.8
SAMD1-202ENST00000533683 CCDC186Q7Z3E2 898 aa32.51■■■□□ 2.79
SAMD1-202ENST00000533683 CNKSR1Q969H4 720 aa32.51■■■□□ 2.79
SAMD1-202ENST00000533683 STK32BQ9NY57 414 aa32.51■■■□□ 2.79
SAMD1-202ENST00000533683 MTMR4Q9NYA4 1195 aa32.51■■■□□ 2.79
SAMD1-202ENST00000533683 SCN9AQ15858 1988 aa32.5■■■□□ 2.79
SAMD1-202ENST00000533683 M0R2N6 131 aa32.5■■■□□ 2.79
SAMD1-202ENST00000533683 STXBP3O00186 592 aa32.5■■■□□ 2.79
SAMD1-202ENST00000533683 ACTN4O43707 911 aaKnown RBP32.5■■■□□ 2.79
SAMD1-202ENST00000533683 AKR1B1P15121 316 aa32.5■■■□□ 2.79
SAMD1-202ENST00000533683 POSTNQ15063 836 aa32.5■■■□□ 2.79
SAMD1-202ENST00000533683 STRIP1Q5VSL9 837 aa32.5■■■□□ 2.79
SAMD1-202ENST00000533683 ECE2O60344 883 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 NCAPHQ15003 741 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 CCDC148Q8NFR7 591 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 C7orf43Q8WVR3 580 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 MYH8P13535 1937 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 DACT2Q5SW24 774 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 KIAA0825Q8IV33 1275 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 RASGRP4Q8TDF6 673 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 ZDHHC15Q96MV8 337 aa32.49■■■□□ 2.79
SAMD1-202ENST00000533683 NFIAQ12857 509 aa32.48■■■□□ 2.79
SAMD1-202ENST00000533683 SYMPKQ92797 1274 aaKnown RBP32.48■■■□□ 2.79
SAMD1-202ENST00000533683 SWAP70Q9UH65 585 aa32.48■■■□□ 2.79
SAMD1-202ENST00000533683 A0A087X0B3 334 aa32.48■■■□□ 2.79
SAMD1-202ENST00000533683 IGKV6D-41A0A0C4DH26 115 aa32.48■■■□□ 2.79
SAMD1-202ENST00000533683 MCM7P33993 719 aa32.48■■■□□ 2.79
SAMD1-202ENST00000533683 FKBP1AP62942 108 aaKnown RBP32.48■■■□□ 2.79
SAMD1-202ENST00000533683 DAGLBQ8NCG7 672 aa32.48■■■□□ 2.79
SAMD1-202ENST00000533683 USP17L5A8MUK1 530 aa32.47■■■□□ 2.79
SAMD1-202ENST00000533683 PRR29P0C7W0 189 aa32.47■■■□□ 2.79
SAMD1-202ENST00000533683 GALNT17Q6IS24 598 aa32.47■■■□□ 2.79
SAMD1-202ENST00000533683 PDZRN4Q6ZMN7 1036 aaPredicted RBP32.47■■■□□ 2.79
SAMD1-202ENST00000533683 MRIQ9BWK5 157 aa32.47■■■□□ 2.79
SAMD1-202ENST00000533683 VWA3AA6NCI4 1184 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 SMTNL1A8MU46 457 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 IKBKBO14920 756 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 KANK3Q6NY19 840 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 PCDHA6Q9UN73 950 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 PCDHA8Q9Y5H6 950 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 PCDHAC2Q9Y5I4 1007 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 SMARCA1P28370 1054 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 SHMT1P34896 483 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 NT5DC1Q5TFE4 455 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 GRAMD1CQ8IYS0 662 aa32.46■■■□□ 2.79
SAMD1-202ENST00000533683 BMP6P22004 513 aa32.45■■■□□ 2.79
SAMD1-202ENST00000533683 FAM177A1Q8N128 213 aaPredicted RBP32.45■■■□□ 2.79
SAMD1-202ENST00000533683 PDHBP11177 359 aa32.45■■■□□ 2.78
SAMD1-202ENST00000533683 SARSP49591 514 aaKnown RBP32.45■■■□□ 2.78
SAMD1-202ENST00000533683 DHX58Q96C10 678 aa32.45■■■□□ 2.78
SAMD1-202ENST00000533683 PYCARDQ9ULZ3 195 aa32.45■■■□□ 2.78
SAMD1-202ENST00000533683 MYO3BQ8WXR4 1341 aa32.45■■■□□ 2.78
SAMD1-202ENST00000533683 ZNF646O15015 1829 aaPredicted RBP32.44■■■□□ 2.78
SAMD1-202ENST00000533683 GOLGB1Q14789 3259 aaKnown RBP32.44■■■□□ 2.78
SAMD1-202ENST00000533683 CCDC144BQ3MJ40 725 aa32.44■■■□□ 2.78
SAMD1-202ENST00000533683 CLEC10AQ8IUN9 316 aa32.44■■■□□ 2.78
SAMD1-202ENST00000533683 ZFPM1Q8IX07 1006 aa32.44■■■□□ 2.78
SAMD1-202ENST00000533683 C17orf53Q8N3J3 647 aaPredicted RBP32.44■■■□□ 2.78
SAMD1-202ENST00000533683 MAN1B1Q9UKM7 699 aa32.44■■■□□ 2.78
SAMD1-202ENST00000533683 CCDC194A0A1B0GVG4 234 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 HLA-DOAP06340 250 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 AOC3Q16853 763 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 HOMER1Q86YM7 354 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 RRP36Q96EU6 259 aaKnown RBP32.43■■■□□ 2.78
SAMD1-202ENST00000533683 EIF6P56537 245 aaKnown RBP32.43■■■□□ 2.78
SAMD1-202ENST00000533683 NOLC1Q14978 699 aaKnown RBP eCLIP32.43■■■□□ 2.78
SAMD1-202ENST00000533683 IL17AQ16552 155 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 LRRC47Q8N1G4 583 aaKnown RBP32.43■■■□□ 2.78
SAMD1-202ENST00000533683 C4orf32Q8N8J7 132 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 KIAA1524Q8TCG1 905 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 ZMYND12Q9H0C1 365 aa32.43■■■□□ 2.78
SAMD1-202ENST00000533683 TPM4P67936 248 aa32.42■■■□□ 2.78
SAMD1-202ENST00000533683 HDLBPQ00341 1268 aaKnown RBP32.42■■■□□ 2.78
SAMD1-202ENST00000533683 NAP1L5Q96NT1 182 aaPredicted RBP32.42■■■□□ 2.78
SAMD1-202ENST00000533683 VAT1LQ9HCJ6 419 aa32.42■■■□□ 2.78
SAMD1-202ENST00000533683 SLFN14P0C7P3 912 aa32.42■■■□□ 2.78
SAMD1-202ENST00000533683 SMARCE1Q969G3 411 aa32.42■■■□□ 2.78
SAMD1-202ENST00000533683 UBA5Q9GZZ9 404 aa32.42■■■□□ 2.78
SAMD1-202ENST00000533683 HSD3B7Q9H2F3 369 aa32.42■■■□□ 2.78
SAMD1-202ENST00000533683 CACNB3P54284 484 aa32.41■■■□□ 2.78
SAMD1-202ENST00000533683 NAPAP54920 295 aa32.41■■■□□ 2.78
SAMD1-202ENST00000533683 PIGSQ96S52 555 aa32.41■■■□□ 2.78
SAMD1-202ENST00000533683 TTLL1O95922 423 aa32.41■■■□□ 2.78
SAMD1-202ENST00000533683 RBM5P52756 815 aaKnown RBP eCLIP32.41■■■□□ 2.78
SAMD1-202ENST00000533683 SPATA20Q8TB22 786 aa32.41■■■□□ 2.78
SAMD1-202ENST00000533683 EHD4Q9H223 541 aa32.41■■■□□ 2.78
SAMD1-202ENST00000533683 RIOX1Q9H6W3 641 aa32.41■■■□□ 2.78
SAMD1-202ENST00000533683 SEC63Q9UGP8 760 aaKnown RBP32.41■■■□□ 2.78
SAMD1-202ENST00000533683 FRMPD2Q68DX3 1309 aaPredicted RBP32.4■■■□□ 2.78
SAMD1-202ENST00000533683 SLURP2P0DP57 97 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms