RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 SMG9Q9H0W8 520 aaKnown RBP7.8□□□□□ -1.16
SOX6-216ENST00000533658 SRA1Q9HD15 236 aaKnown RBP7.8□□□□□ -1.16
SOX6-216ENST00000533658 DLG5Q8TDM6 1919 aa7.8□□□□□ -1.16
SOX6-216ENST00000533658 WDR33Q9C0J8 1336 aaKnown RBP7.79□□□□□ -1.16
SOX6-216ENST00000533658 SNED1Q8TER0 1413 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 KLRG2A4D1S0 409 aaPredicted RBP7.79□□□□□ -1.16
SOX6-216ENST00000533658 ZBTB42B2RXF5 422 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 NEFMP07197 916 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 HCLS1P14317 486 aaPredicted RBP7.79□□□□□ -1.16
SOX6-216ENST00000533658 DEFB115Q30KQ5 88 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 CLEC4GQ6UXB4 293 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 KIF6Q6ZMV9 814 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 LRP10Q7Z4F1 713 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 PNMA8AQ86V59 439 aaPredicted RBP7.79□□□□□ -1.16
SOX6-216ENST00000533658 CNTROBQ8N137 903 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 ARMC10Q8N2F6 343 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 TRPM4Q8TD43 1214 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 DBNDD2Q9BQY9 259 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 C7orf69Q9H7B7 122 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 ABT1Q9ULW3 272 aaKnown RBP7.79□□□□□ -1.16
SOX6-216ENST00000533658 KDM3BQ7LBC6 1761 aa7.79□□□□□ -1.16
SOX6-216ENST00000533658 LTBP1Q14766 1721 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 FZD9O00144 591 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 NTSR2O95665 410 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 EPB42P16452 691 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
SOX6-216ENST00000533658 GPLD1P80108 840 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 MLLT1Q03111 559 aaPredicted RBP7.78□□□□□ -1.16
SOX6-216ENST00000533658 RNF43Q68DV7 783 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 DHX32Q7L7V1 743 aaKnown RBP7.78□□□□□ -1.16
SOX6-216ENST00000533658 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.78□□□□□ -1.16
SOX6-216ENST00000533658 ZNF34Q8IZ26 560 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 XAGE3Q8WTP9 111 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 CAPNS2Q96L46 248 aa7.78□□□□□ -1.16
SOX6-216ENST00000533658 DDX21Q9NR30 783 aaKnown RBP eCLIP7.78□□□□□ -1.16
SOX6-216ENST00000533658 NOVA2Q9UNW9 492 aaKnown RBP7.78□□□□□ -1.16
SOX6-216ENST00000533658 CCDC85CA6NKD9 419 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 TGFBR3LH3BV60 316 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 IARSP41252 1262 aaKnown RBP7.77□□□□□ -1.17
SOX6-216ENST00000533658 CRY2Q49AN0 593 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 IER5Q5VY09 327 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 COPS6Q7L5N1 327 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 TRIM42Q8IWZ5 723 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 RTKN2Q8IZC4 609 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 GPC2Q8N158 579 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 PNISRQ8TF01 805 aaKnown RBP7.77□□□□□ -1.17
SOX6-216ENST00000533658 RPGRQ92834 1020 aaKnown RBP7.77□□□□□ -1.17
SOX6-216ENST00000533658 CCDC97Q96F63 343 aaPredicted RBP7.77□□□□□ -1.17
SOX6-216ENST00000533658 ASIC4Q96FT7 647 aa7.77□□□□□ -1.17
SOX6-216ENST00000533658 TNRC18O15417 2968 aaPredicted RBP7.77□□□□□ -1.17
SOX6-216ENST00000533658 LAMB4A4D0S4 1761 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 ERVV-1B6SEH8 477 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 TRAF5O00463 557 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 ELL2O00472 640 aaPredicted RBP7.76□□□□□ -1.17
SOX6-216ENST00000533658 EPS15P42566 896 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 RGS19P49795 217 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 GRM1Q13255 1194 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 AOC3Q16853 763 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 CCDC184Q52MB2 194 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 CYP4F22Q6NT55 531 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 MAP4K3Q8IVH8 894 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 JARID2Q92833 1246 aaPredicted RBP7.76□□□□□ -1.17
SOX6-216ENST00000533658 ZFATQ9P243 1243 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 CHPF2Q9P2E5 772 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 COL4A1P02462 1669 aa7.76□□□□□ -1.17
SOX6-216ENST00000533658 SHTN1A0MZ66 631 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 WEE1P30291 646 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 ALDH1B1P30837 517 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 ECE1P42892 770 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 SETDB1Q15047 1291 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 SWI5Q1ZZU3 235 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 UVSSAQ2YD98 709 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 CST9Q5W186 159 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 NLRP10Q86W26 655 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 GPR101Q96P66 508 aaPredicted RBP7.75□□□□□ -1.17
SOX6-216ENST00000533658 PSMD1Q99460 953 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 NYXQ9GZU5 481 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 ABCC4O15439 1325 aa7.75□□□□□ -1.17
SOX6-216ENST00000533658 MYBBP1AQ9BQG0 1328 aaKnown RBP7.75□□□□□ -1.17
SOX6-216ENST00000533658 PDE4DIPQ5VU43 2346 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 NUP98P52948 1817 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 HMX2A2RU54 273 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 EIF2AK2P19525 551 aaKnown RBP7.74□□□□□ -1.17
SOX6-216ENST00000533658 GRNP28799 593 aaKnown RBP7.74□□□□□ -1.17
SOX6-216ENST00000533658 RALBP1Q15311 655 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 SPOCD1Q6ZMY3 1216 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 CBLL1Q75N03 491 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 JDP2Q8WYK2 163 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 FAM89AQ96GI7 184 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 RBM17Q96I25 401 aaKnown RBP7.74□□□□□ -1.17
SOX6-216ENST00000533658 UTP14AQ9BVJ6 771 aaKnown RBP7.74□□□□□ -1.17
SOX6-216ENST00000533658 CEP41Q9BYV8 373 aa7.74□□□□□ -1.17
SOX6-216ENST00000533658 RIC1Q4ADV7 1423 aa7.73□□□□□ -1.17
SOX6-216ENST00000533658 CHL1O00533 1208 aa7.73□□□□□ -1.17
SOX6-216ENST00000533658 APAF1O14727 1248 aa7.73□□□□□ -1.17
SOX6-216ENST00000533658 PPIP5K2O43314 1243 aa7.73□□□□□ -1.17
SOX6-216ENST00000533658 AOC2O75106 756 aa7.73□□□□□ -1.17
SOX6-216ENST00000533658 RAD17O75943 681 aa7.73□□□□□ -1.17
SOX6-216ENST00000533658 HOXA10P31260 410 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms