RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 ZNF280CQ8ND82 737 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 NCOA5Q9HCD5 579 aaKnown RBP15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 ARHGEF10LQ9HCE6 1279 aa15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 FAM217BQ9NTX9 383 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 NAP1L2Q9ULW6 460 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC4-214ENST00000533632 NID2Q14112 1375 aa15.65■□□□□ 0.1
TRAPPC4-214ENST00000533632 NDUFB10O96000 172 aa15.65■□□□□ 0.1
TRAPPC4-214ENST00000533632 IFNL1Q8IU54 200 aa15.65■□□□□ 0.1
TRAPPC4-214ENST00000533632 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
TRAPPC4-214ENST00000533632 ZNF274Q96GC6 653 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-214ENST00000533632 PARP14Q460N5 1801 aa15.65■□□□□ 0.1
TRAPPC4-214ENST00000533632 F5H6K3 240 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 ZBTB43O43298 467 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 DDAH1O94760 285 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 SNHG28P0DPA3 235 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 PDHBP11177 359 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 CDC27P30260 824 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 CCT2P78371 535 aaKnown RBP15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 NUCB2P80303 420 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 MAP2K1Q02750 393 aaPredicted RBP15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 KLRC3Q07444 240 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 SCRN1Q12765 414 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 GPAT2Q6NUI2 795 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 CATIPQ7Z7H3 387 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 SPICE1Q8N0Z3 855 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 FAM43AQ8N2R8 423 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 GMCL1P1Q8NEA9 526 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 FEZ1Q99689 392 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 KIAA1683Q9H0B3 1180 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 EMILIN3Q9NT22 766 aa15.64■□□□□ 0.1
TRAPPC4-214ENST00000533632 BTBD19C9JJ37 291 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 USP17L10C9JJH3 530 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 PFKFB2O60825 505 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 CETPP11597 493 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 BACE1P56817 501 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 INHBEP58166 350 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 SREBF2Q12772 1141 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 SH3D19Q5HYK7 790 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 USP17L2Q6R6M4 530 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 STAG2Q8N3U4 1231 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 NUP88Q99567 741 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 VCPKMTQ9H867 229 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 AS3MTQ9HBK9 375 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 RNF186Q9NXI6 227 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 SYNPO2Q9UMS6 1093 aa15.64■□□□□ 0.09
TRAPPC4-214ENST00000533632 BAZ2BQ9UIF8 2168 aaKnown RBP15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 GOLGA8AA7E2F4 631 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 RAD21O60216 631 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 GOLGA8HP0CJ92 632 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 HSPA1AP0DMV8 641 aaKnown RBP15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 HSPA1BP0DMV9 641 aaKnown RBP15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 HMGCS2P54868 508 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 GRM4Q14833 912 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 SLC35G1Q2M3R5 365 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 SLFN13Q68D06 897 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 FANCBQ8NB91 859 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 GTF3C6Q969F1 213 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 R3HDMLQ9H3Y0 253 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 MAD2L2Q9UI95 211 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 RLFQ13129 1914 aa15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 FRMPD2Q68DX3 1309 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC4-214ENST00000533632 ADD1P35611 737 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 METAP2P50579 478 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 RCAN1P53805 252 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 CPVLQ9H3G5 476 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 PALM3A6NDB9 673 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 FOXN1O15353 648 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 PLEKHA8P1O95397 391 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 ZNF543Q08ER8 600 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 NFKBIBQ15653 356 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 TREML2Q5T2D2 321 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 SYNE3Q6ZMZ3 975 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 KCTD1Q719H9 257 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 NBPF11Q86T75 865 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 CCDC83Q8IWF9 413 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 CMTR1Q8N1G2 835 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 GMCL1Q96IK5 515 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 SH2D4AQ9H788 454 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 GOPCQ9HD26 462 aa15.62■□□□□ 0.09
TRAPPC4-214ENST00000533632 PPFIA3O75145 1194 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 TRPA1O75762 1119 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 CTDNEP1O95476 244 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 VCAM1P19320 739 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 RTN1Q16799 776 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 TTBK2Q6IQ55 1244 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 ANKRD23Q86SG2 305 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 MAP3K14Q99558 947 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 TSKSQ9UJT2 592 aa15.61■□□□□ 0.09
TRAPPC4-214ENST00000533632 CALM1P0DP23 149 aa15.6■□□□□ 0.09
TRAPPC4-214ENST00000533632 CALM2P0DP24 149 aa15.6■□□□□ 0.09
TRAPPC4-214ENST00000533632 CALM3P0DP25 149 aa15.6■□□□□ 0.09
TRAPPC4-214ENST00000533632 PDIA4P13667 645 aaKnown RBP15.6■□□□□ 0.09
TRAPPC4-214ENST00000533632 SLC1A4P43007 532 aa15.6■□□□□ 0.09
TRAPPC4-214ENST00000533632 FUT2Q10981 343 aa15.6■□□□□ 0.09
TRAPPC4-214ENST00000533632 NTRK3Q16288 839 aa15.6■□□□□ 0.09
TRAPPC4-214ENST00000533632 FAM83BQ5T0W9 1011 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms