RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PDE6BP35913 854 aa13.9□□□□□ -0.19
RAD50-209ENST00000533482 CKAP4Q07065 602 aaKnown RBP13.9□□□□□ -0.19
RAD50-209ENST00000533482 MARCH10Q8NA82 808 aaPredicted RBP13.9□□□□□ -0.19
RAD50-209ENST00000533482 PLEKHA4Q9H4M7 779 aa13.9□□□□□ -0.19
RAD50-209ENST00000533482 SAMSN1Q9NSI8 373 aaKnown RBP13.9□□□□□ -0.19
RAD50-209ENST00000533482 FMNL1O95466 1100 aaPredicted RBP13.89□□□□□ -0.19
RAD50-209ENST00000533482 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 IFT81Q8WYA0 676 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 NLRC4Q9NPP4 1024 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 BSDC1Q9NW68 430 aaPredicted RBP13.89□□□□□ -0.19
RAD50-209ENST00000533482 CDC27P30260 824 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 RABL6Q3YEC7 729 aaPredicted RBP13.89□□□□□ -0.19
RAD50-209ENST00000533482 NAPGQ99747 312 aaPredicted RBP13.89□□□□□ -0.19
RAD50-209ENST00000533482 PPP2R2CQ9Y2T4 447 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 NEDD4P46934 1319 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 CAPN2P17655 700 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 CYP26C1Q6V0L0 522 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 KRT25Q7Z3Z0 450 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 ZNF408Q9H9D4 720 aa13.89□□□□□ -0.19
RAD50-209ENST00000533482 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 PPEF1O14829 653 aaPredicted RBP13.88□□□□□ -0.19
RAD50-209ENST00000533482 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 FAM196BA6NMK8 535 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 RAD17O75943 681 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 MMP1P03956 469 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 KCTD1Q719H9 257 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 FAM212AQ96EL1 285 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 ARHGEF10LQ9HCE6 1279 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 LEMD3Q9Y2U8 911 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 RIPOR2Q9Y4F9 1068 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 COL15A1P39059 1388 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 AFF2P51816 1311 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 SHTN1A0MZ66 631 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 GDF11O95390 407 aa13.88□□□□□ -0.19
RAD50-209ENST00000533482 NAA30Q147X3 362 aaPredicted RBP13.88□□□□□ -0.19
RAD50-209ENST00000533482 CERKLQ49MI3 558 aaPredicted RBP13.87□□□□□ -0.19
RAD50-209ENST00000533482 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 RGS22Q8NE09 1264 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 GSTTP1A0A1W2PQM5 241 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 ZNF609O15014 1411 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 PPP6R2O75170 966 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 HARSP12081 509 aaKnown RBP13.87□□□□□ -0.19
RAD50-209ENST00000533482 CLEC4GQ6UXB4 293 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 RNF26Q9BY78 433 aaPredicted RBP13.87□□□□□ -0.19
RAD50-209ENST00000533482 RSPH14Q9UHP6 348 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 COL3A1P02461 1466 aaPredicted RBP13.87□□□□□ -0.19
RAD50-209ENST00000533482 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 TRAF1Q13077 416 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 MORC3Q14149 939 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 MB21D2Q8IYB1 491 aaPredicted RBP13.87□□□□□ -0.19
RAD50-209ENST00000533482 PAF1Q8N7H5 531 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 FOXP1Q9H334 677 aaPredicted RBP13.87□□□□□ -0.19
RAD50-209ENST00000533482 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.87□□□□□ -0.19
RAD50-209ENST00000533482 DIP2BQ9P265 1576 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 CCDC65Q8IXS2 484 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 COA7Q96BR5 231 aa13.87□□□□□ -0.19
RAD50-209ENST00000533482 SORBS3O60504 671 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 LIFRP42702 1097 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 ICA1Q05084 483 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 NIM1KQ8IY84 436 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 PPP1R13BQ96KQ4 1090 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 MAN1B1Q9UKM7 699 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 THRAP3Q9Y2W1 955 aaKnown RBP13.86□□□□□ -0.19
RAD50-209ENST00000533482 KRT13P13646 458 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 UBXN2AP68543 259 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 CYP4A11Q02928 519 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 PRR16Q569H4 304 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 RNF187Q5TA31 235 aaPredicted RBP13.86□□□□□ -0.19
RAD50-209ENST00000533482 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 PSTPIP2Q9H939 334 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAD50-209ENST00000533482 SLC39A2Q9NP94 309 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 TECPR2O15040 1411 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 TMEM110-MUSTN1A8MSY1 372 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 CASP14P31944 242 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 ITPK1Q13572 414 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 SPATA1Q5VX52 437 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 RDH13Q8NBN7 331 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 DYDC1Q8WWB3 177 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 RABEP2Q9H5N1 569 aa13.86□□□□□ -0.19
RAD50-209ENST00000533482 KIF28PB7ZC32 967 aa13.85□□□□□ -0.19
RAD50-209ENST00000533482 TRIM28Q13263 835 aaKnown RBP13.85□□□□□ -0.19
RAD50-209ENST00000533482 GRAPQ13588 217 aa13.85□□□□□ -0.19
RAD50-209ENST00000533482 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
RAD50-209ENST00000533482 GRAPLQ8TC17 118 aaPredicted RBP13.85□□□□□ -0.19
RAD50-209ENST00000533482 SH3RF3Q8TEJ3 882 aaPredicted RBP13.85□□□□□ -0.19
RAD50-209ENST00000533482 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
RAD50-209ENST00000533482 MAP2P11137 1827 aaKnown RBP13.85□□□□□ -0.19
RAD50-209ENST00000533482 PTPROQ16827 1216 aa13.85□□□□□ -0.19
RAD50-209ENST00000533482 ANKRD13CQ8N6S4 541 aa13.85□□□□□ -0.19
RAD50-209ENST00000533482 VWDEQ8N2E2 1590 aa13.85□□□□□ -0.19
RAD50-209ENST00000533482 TMEM131LA2VDJ0 1609 aa13.85□□□□□ -0.19
RAD50-209ENST00000533482 CPDO75976 1380 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms