RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 KLHL10Q6JEL2 608 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 APTXQ7Z2E3 356 aaKnown RBP17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 ZNF444Q8N0Y2 327 aaPredicted RBP17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 BLZF1Q9H2G9 400 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 TCP11L1Q9NUJ3 509 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 ZNF215Q9UL58 517 aaPredicted RBP17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 STX8Q9UNK0 236 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 PPP1R3GB7ZBB8 358 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 NR1I3Q14994 352 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 SYT10Q6XYQ8 523 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 PCDHA4Q9UN74 947 aa17.44■□□□□ 0.38
CACNA1E-208ENST00000533229 TAF1LQ8IZX4 1826 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 LY75O60449 1722 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 SPATA31A6Q5VVP1 1343 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 SERPINB2P05120 415 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 GOLGA8HP0CJ92 632 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 WWC2Q6AWC2 1192 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 PDCL2Q8N4E4 241 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 CCDC94Q9BW85 323 aaPredicted RBP17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 CPVLQ9H3G5 476 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 SH3GLB2Q9NR46 395 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 POLLQ9UGP5 575 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 SBF2Q86WG5 1849 aa17.43■□□□□ 0.38
CACNA1E-208ENST00000533229 NRDCO43847 1150 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 IGSF3O75054 1194 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 IL1R1P14778 569 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 CALML3P27482 149 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 ADKP55263 362 aaKnown RBP17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 SYCP1Q15431 976 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 SPECC1LQ69YQ0 1117 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 SEPT12Q8IYM1 358 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 TC2NQ8N9U0 490 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 CCDC34Q96HJ3 373 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 GPR75-ASB3A0A0A6YYF3 556 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 TEX33O43247 280 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 ONECUT3O60422 494 aaPredicted RBP17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 COBLO75128 1261 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 LDHCP07864 332 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 ADRA2BP18089 450 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 PPP4R3BQ5MIZ7 849 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 SPATA1Q5VX52 437 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 IQUBQ8NA54 791 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 GGA1Q9UJY5 639 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 PCDHA6Q9UN73 950 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 PCDHA8Q9Y5H6 950 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 CCDC88AQ3V6T2 1871 aa17.42■□□□□ 0.38
CACNA1E-208ENST00000533229 A0A1B0GTH6 734 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 KIF2AO00139 706 aaPredicted RBP17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 FANCGO15287 622 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 CDK8P49336 464 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 RHBDL3P58872 404 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 REXO1L1PQ8IX06 675 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 AMOTL1Q8IY63 956 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 V9GYY5 206 aaPredicted RBP17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 HEATR3Q7Z4Q2 680 aa17.41■□□□□ 0.38
CACNA1E-208ENST00000533229 FLT1P17948 1338 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 SYNRGQ9UMZ2 1314 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 STXBP3O00186 592 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 NT5C2P49902 561 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 GNAQP50148 359 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 CT47A1Q5JQC4 288 aaPredicted RBP17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 MFSD14BQ5SR56 506 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 CDKAL1Q5VV42 579 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 ARL6IP4Q66PJ3 421 aaKnown RBP17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 TRIM65Q6PJ69 517 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 TEX11Q8IYF3 940 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 TMEM60Q9H2L4 133 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
CACNA1E-208ENST00000533229 ST5P78524 1137 aa17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 DDR1Q08345 913 aa17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 INF2Q27J81 1249 aa17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 RBM17Q96I25 401 aaKnown RBP17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 EYA3Q99504 573 aa17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 BAG1Q99933 345 aaPredicted RBP17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 SNED1Q8TER0 1413 aa17.39■□□□□ 0.38
CACNA1E-208ENST00000533229 AFF2P51816 1311 aa17.39■□□□□ 0.37
CACNA1E-208ENST00000533229 PP2D1A8MPX8 630 aa17.39■□□□□ 0.37
CACNA1E-208ENST00000533229 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
CACNA1E-208ENST00000533229 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
CACNA1E-208ENST00000533229 KARSQ15046 597 aaKnown RBP17.39■□□□□ 0.37
CACNA1E-208ENST00000533229 FBXO41Q8TF61 875 aa17.39■□□□□ 0.37
CACNA1E-208ENST00000533229 L2HGDHQ9H9P8 463 aa17.39■□□□□ 0.37
CACNA1E-208ENST00000533229 CCDC194A0A1B0GVG4 234 aa17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 LONP1P36776 959 aaKnown RBP17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 ETF1P62495 437 aaKnown RBP17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 CCDC93Q567U6 631 aa17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 MEX3CQ5U5Q3 659 aaKnown RBP17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 HOMER1Q86YM7 354 aa17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 PODXL2Q9NZ53 605 aa17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 ADD3Q9UEY8 706 aaKnown RBP17.38■□□□□ 0.37
CACNA1E-208ENST00000533229 BBOX1O75936 387 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms