RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 MPP4Q96JB8 637 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 BATF3Q9NR55 127 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 NOD1Q9Y239 953 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 CLTCL1P53675 1640 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 ZBTB43O43298 467 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 IGHDP01880 384 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 CCDC15Q0P6D6 951 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 APOBRQ0VD83 1088 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 COPS6Q7L5N1 327 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 ARHGAP22Q7Z5H3 698 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 CCHCR1Q8TD31 782 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 ARHGAP45Q92619 1136 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 GFM2Q969S9 779 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 BEGAINQ9BUH8 593 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.69□□□□□ -1.181e-7■■■■□ 19.9
TGFBR3-210ENST00000533089 SPATA31A3Q5VYP0 1347 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 LSM1O15116 133 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 SKIP12755 728 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 PHBP35232 272 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 SLC20A2Q08357 652 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 LONRF2Q1L5Z9 754 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 TPTE2Q6XPS3 522 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 ST13P4Q8IZP2 240 aaPredicted RBP7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 KIAA0232Q92628 1395 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 HOXB7P09629 217 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 LONP1P36776 959 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 KANK3Q6NY19 840 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 CCDC62Q6P9F0 684 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 UBE2Q1Q7Z7E8 422 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 ARHGEF25Q86VW2 580 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 UNC45AQ9H3U1 944 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 SH2D4AQ9H788 454 aa7.69□□□□□ -1.18
TGFBR3-210ENST00000533089 NDC80O14777 642 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 DKC1O60832 514 aaKnown RBP eCLIP7.68□□□□□ -1.186e-7■■■■■ 75.9
TGFBR3-210ENST00000533089 SUPT3HO75486 399 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 RXRBP28702 533 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 KCNV2Q8TDN2 545 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 PPP1R14BQ96C90 147 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 NKIRAS1Q9NYS0 192 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 PKD2L1Q9P0L9 805 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 MCM8Q9UJA3 840 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 BACH1O14867 736 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 GNPATO15228 680 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 SKAP2O75563 359 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 ALDH1L1O75891 902 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 TUBB2AQ13885 445 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 CCDC102BQ68D86 513 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 CCDC117Q8IWD4 279 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 SPDYE1Q8NFV5 336 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 TUBB2BQ9BVA1 445 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 ANLNQ9NQW6 1124 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 ERVV-2B6SEH9 535 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 DNAJC6O75061 913 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 FAM13AO94988 1023 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 TNNI2P48788 182 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 FYB2Q5VWT5 728 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 TBC1D9Q6ZT07 1266 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 GET4Q7L5D6 327 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 MIGA1Q8NAN2 632 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 Q9H521 79 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 RMND1Q9NWS8 449 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 WDR17Q8IZU2 1322 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 MGEA5O60502 916 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 APBA3O96018 575 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 NME8Q8N427 588 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 HELBQ8NG08 1087 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 ZNF653Q96CK0 615 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 RRP36Q96EU6 259 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 TMX3Q96JJ7 454 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 ALG1Q9BT22 464 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 TSGA10Q9BZW7 698 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 MCM9Q9NXL9 1143 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 N4BP3O15049 544 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 KRT14P02533 472 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 ERCC5P28715 1186 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 IFI16Q16666 785 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 SLC9C2Q5TAH2 1124 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 RUFY4Q6ZNE9 571 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 UNC5CLQ8IV45 518 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 EPSTI1Q96J88 318 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 EYA3Q99504 573 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 CNNM2Q9H8M5 875 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 ALKQ9UM73 1620 aa7.68□□□□□ -1.18
TGFBR3-210ENST00000533089 PSMC1P62191 440 aaKnown RBP7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 CCDC144BQ3MJ40 725 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 TRAPPC3LQ5T215 181 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 RBM17Q96I25 401 aaKnown RBP7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 NCOA3Q9Y6Q9 1424 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 JCADQ9P266 1359 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 KIF1BO60333 1816 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 HNRNPH1P31943 449 aaKnown RBP7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 CYLC1P35663 651 aaPredicted RBP7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 ASIC1P78348 528 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 LMBR1LQ6UX01 489 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 GSTA5Q7RTV2 222 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 ZC3H18Q86VM9 953 aaKnown RBP7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 TBC1D22AQ8WUA7 517 aa7.67□□□□□ -1.18
TGFBR3-210ENST00000533089 DACT3Q96B18 629 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 183.4 ms