RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 MUC3AQ02505 3323 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 A0A1W2PQ45 241 aaPredicted RBP17.5■□□□□ 0.39
CDC27-209ENST00000532893 A0A1W2PQY0 241 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 CYP2D6P10635 497 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 COL9A1P20849 921 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 TMEM132BQ14DG7 1078 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 TMED8Q6PL24 325 aaPredicted RBP17.5■□□□□ 0.39
CDC27-209ENST00000532893 TMEM179Q6ZVK1 233 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 CLEC10AQ8IUN9 316 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 MMP19Q99542 508 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 ZNF576Q9H609 170 aa17.5■□□□□ 0.39
CDC27-209ENST00000532893 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 MYO9BQ13459 2157 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 TNFRSF10AO00220 468 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 SLC25A27O95847 323 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 FAAP100Q0VG06 881 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 SLC9C2Q5TAH2 1124 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 SDR42E1Q8WUS8 393 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 PPM1EQ8WY54 764 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 LENG1Q96BZ8 264 aaPredicted RBP17.49■□□□□ 0.39
CDC27-209ENST00000532893 DYNLL2Q96FJ2 89 aa17.49■□□□□ 0.39
CDC27-209ENST00000532893 DCDC2CA8MYV0 355 aa17.48■□□□□ 0.39
CDC27-209ENST00000532893 ZNF865P0CJ78 1059 aaPredicted RBP17.48■□□□□ 0.39
CDC27-209ENST00000532893 PDE6AP16499 860 aa17.48■□□□□ 0.39
CDC27-209ENST00000532893 ZNF792Q3KQV3 632 aa17.48■□□□□ 0.39
CDC27-209ENST00000532893 TIFAQ96CG3 184 aa17.48■□□□□ 0.39
CDC27-209ENST00000532893 VCPKMTQ9H867 229 aa17.48■□□□□ 0.39
CDC27-209ENST00000532893 ARHGEF10LQ9HCE6 1279 aa17.48■□□□□ 0.39
CDC27-209ENST00000532893 DCP1AQ9NPI6 582 aaPredicted RBP17.48■□□□□ 0.39
CDC27-209ENST00000532893 TMX2Q9Y320 296 aa17.48■□□□□ 0.39
CDC27-209ENST00000532893 AKR1B1P15121 316 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 ICA1Q05084 483 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 KCTD2Q14681 263 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 ZKSCAN2Q63HK3 967 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 ANKRD33Q7Z3H0 272 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 AACSQ86V21 672 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 RIOX2Q8IUF8 465 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 TOX2Q96NM4 488 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 STARD7Q9NQZ5 370 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 FBXO28Q9NVF7 368 aa17.47■□□□□ 0.39
CDC27-209ENST00000532893 ZNFX1Q9P2E3 1918 aaKnown RBP17.47■□□□□ 0.39
CDC27-209ENST00000532893 WDR46O15213 610 aaKnown RBP17.46■□□□□ 0.39
CDC27-209ENST00000532893 TIMP1P01033 207 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 AKR1A1P14550 325 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 STAT3P40763 770 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 ACLYP53396 1101 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 TTF1Q15361 905 aaPredicted RBP17.46■□□□□ 0.39
CDC27-209ENST00000532893 NUP133Q8WUM0 1156 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.46■□□□□ 0.394e-7■■□□□ 13
CDC27-209ENST00000532893 TSEN34Q9BSV6 310 aaKnown RBP17.46■□□□□ 0.39
CDC27-209ENST00000532893 SH2D4AQ9H788 454 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 SWAP70Q9UH65 585 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 RAPGEFL1Q9UHV5 662 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 ADAMTS5Q9UNA0 930 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
CDC27-209ENST00000532893 DIS3Q9Y2L1 958 aaKnown RBP17.46■□□□□ 0.39
CDC27-209ENST00000532893 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.38
CDC27-209ENST00000532893 GRXCR1A8MXD5 290 aa17.45■□□□□ 0.38
CDC27-209ENST00000532893 ADAMTS4O75173 837 aa17.45■□□□□ 0.38
CDC27-209ENST00000532893 KCNA10Q16322 511 aa17.45■□□□□ 0.38
CDC27-209ENST00000532893 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
CDC27-209ENST00000532893 LCORLQ8N3X6 602 aa17.45■□□□□ 0.38
CDC27-209ENST00000532893 GAS2L1Q99501 681 aaPredicted RBP17.45■□□□□ 0.38
CDC27-209ENST00000532893 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
CDC27-209ENST00000532893 SMIM22K7EJ46 135 aa17.44■□□□□ 0.38
CDC27-209ENST00000532893 VWA5AO00534 786 aa17.44■□□□□ 0.38
CDC27-209ENST00000532893 PBX2P40425 430 aa17.44■□□□□ 0.38
CDC27-209ENST00000532893 C16orf59Q7L2K0 433 aa17.44■□□□□ 0.38
CDC27-209ENST00000532893 PRDM12Q9H4Q4 367 aa17.44■□□□□ 0.38
CDC27-209ENST00000532893 ARMT1Q9H993 441 aa17.44■□□□□ 0.38
CDC27-209ENST00000532893 TCRBV5S4A2TA0A5A2 114 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 PRKAB2O43741 272 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 RAD21O60216 631 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 EEF2P13639 858 aaKnown RBP17.43■□□□□ 0.38
CDC27-209ENST00000532893 CDK8P49336 464 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 MFSD5Q6N075 450 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 KLHDC9Q8NEP7 349 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 VTI1AQ96AJ9 217 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 CCDC17Q96LX7 622 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 PBX4Q9BYU1 374 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 IL1RAPL2Q9NP60 686 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 TBX21Q9UL17 535 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 FAM184BQ9ULE4 1060 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 A0A0G2JMZ2 1700 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 SYNRGQ9UMZ2 1314 aa17.43■□□□□ 0.38
CDC27-209ENST00000532893 CYP2D7A0A087X1C5 515 aa17.42■□□□□ 0.38
CDC27-209ENST00000532893 MOXD2PA6NHM9 499 aa17.42■□□□□ 0.38
CDC27-209ENST00000532893 GOLIM4O00461 696 aa17.42■□□□□ 0.38
CDC27-209ENST00000532893 SNAI1O95863 264 aaPredicted RBP17.42■□□□□ 0.38
CDC27-209ENST00000532893 IRX5P78411 483 aaPredicted RBP17.42■□□□□ 0.38
CDC27-209ENST00000532893 PPIGQ13427 754 aaKnown RBP eCLIP17.42■□□□□ 0.386e-8■■■□□ 16.4
CDC27-209ENST00000532893 CCDC85BQ15834 202 aaPredicted RBP17.42■□□□□ 0.38
CDC27-209ENST00000532893 CCSAPQ6IQ19 270 aaPredicted RBP17.42■□□□□ 0.38
CDC27-209ENST00000532893 ITPRIPQ8IWB1 547 aa17.42■□□□□ 0.38
CDC27-209ENST00000532893 ATXN2LQ8WWM7 1075 aaKnown RBP17.42■□□□□ 0.38
CDC27-209ENST00000532893 DNAJC2Q99543 621 aaKnown RBP17.42■□□□□ 0.38
CDC27-209ENST00000532893 ZNF214Q9UL59 606 aaPredicted RBP17.42■□□□□ 0.38
CDC27-209ENST00000532893 PPP1R9AQ9ULJ8 1098 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms