RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 TTLL1O95922 423 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 CTDSPL2Q05D32 466 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 ALX1Q15699 326 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 FAM47AQ5JRC9 791 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 SHCBP1Q8NEM2 672 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 MKL1Q969V6 931 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 CEP95Q96GE4 821 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 MROH8Q9H579 483 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 RLFQ13129 1914 aa20.47■□□□□ 0.87
PHRF1-204ENST00000532550 FOXP2O15409 715 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 PRKAR2AP13861 404 aaKnown RBP20.46■□□□□ 0.87
PHRF1-204ENST00000532550 ERCC3P19447 782 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 SDSP20132 328 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 CCL14Q16627 93 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 DPP9Q86TI2 863 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 NCAPG2Q86XI2 1143 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 FBXO28Q9NVF7 368 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 ADAMTS5Q9UNA0 930 aa20.46■□□□□ 0.87
PHRF1-204ENST00000532550 GREB1LQ9C091 1923 aaPredicted RBP20.46■□□□□ 0.87
PHRF1-204ENST00000532550 FARP2O94887 1054 aaPredicted RBP20.45■□□□□ 0.86
PHRF1-204ENST00000532550 FGAP02671 866 aa20.45■□□□□ 0.86
PHRF1-204ENST00000532550 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
PHRF1-204ENST00000532550 GRB14Q14449 540 aa20.45■□□□□ 0.86
PHRF1-204ENST00000532550 PPP4R3BQ5MIZ7 849 aa20.45■□□□□ 0.86
PHRF1-204ENST00000532550 CRISPLD2Q9H0B8 497 aa20.45■□□□□ 0.86
PHRF1-204ENST00000532550 ANAPC4Q9UJX5 808 aa20.45■□□□□ 0.86
PHRF1-204ENST00000532550 PPP1R9AQ9ULJ8 1098 aa20.45■□□□□ 0.86
PHRF1-204ENST00000532550 SYNPO2Q9UMS6 1093 aa20.45■□□□□ 0.86
PHRF1-204ENST00000532550 TSPY2A6NKD2 308 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 VWA5AO00534 786 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 SLC25A27O95847 323 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 NDUFB10O96000 172 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 HSPD1P10809 573 aaKnown RBP20.44■□□□□ 0.86
PHRF1-204ENST00000532550 CACNB2Q08289 660 aaPredicted RBP20.44■□□□□ 0.86
PHRF1-204ENST00000532550 TMEM132BQ14DG7 1078 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 MAP3K21Q5TCX8 1036 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 MFSD14CQ5VZR4 134 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 DPF3Q92784 378 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 NUP88Q99567 741 aaPredicted RBP20.44■□□□□ 0.86
PHRF1-204ENST00000532550 SLF1Q9BQI6 1058 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 HTATIP2Q9BUP3 242 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 INCENPQ9NQS7 918 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 SLC5A4Q9NY91 659 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 MYH4Q9Y623 1939 aa20.44■□□□□ 0.86
PHRF1-204ENST00000532550 HIP1O00291 1037 aa20.43■□□□□ 0.86
PHRF1-204ENST00000532550 RANBP6O60518 1105 aaKnown RBP20.43■□□□□ 0.86
PHRF1-204ENST00000532550 HOXC6P09630 235 aa20.43■□□□□ 0.86
PHRF1-204ENST00000532550 STAT3P40763 770 aa20.43■□□□□ 0.86
PHRF1-204ENST00000532550 UBE2Q1Q7Z7E8 422 aa20.43■□□□□ 0.86
PHRF1-204ENST00000532550 ZNF589Q86UQ0 364 aaPredicted RBP20.43■□□□□ 0.86
PHRF1-204ENST00000532550 PRPF38AQ8NAV1 312 aaKnown RBP20.43■□□□□ 0.86
PHRF1-204ENST00000532550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.43■□□□□ 0.86
PHRF1-204ENST00000532550 CCDC171Q6TFL3 1326 aa20.43■□□□□ 0.86
PHRF1-204ENST00000532550 ADORA2AP29274 412 aa20.42■□□□□ 0.86
PHRF1-204ENST00000532550 LRRC47Q8N1G4 583 aaKnown RBP20.42■□□□□ 0.86
PHRF1-204ENST00000532550 NPLOC4Q8TAT6 608 aa20.42■□□□□ 0.86
PHRF1-204ENST00000532550 TOMM22Q9NS69 142 aa20.42■□□□□ 0.86
PHRF1-204ENST00000532550 DIAPH3Q9NSV4 1193 aa20.42■□□□□ 0.86
PHRF1-204ENST00000532550 CTDP1Q9Y5B0 961 aaPredicted RBP20.42■□□□□ 0.86
PHRF1-204ENST00000532550 PLIN4Q96Q06 1357 aa20.42■□□□□ 0.86
PHRF1-204ENST00000532550 ZBED4O75132 1171 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 FCER1AP12319 257 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 SLFN13Q68D06 897 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 CWC27Q6UX04 472 aaKnown RBP20.41■□□□□ 0.86
PHRF1-204ENST00000532550 RIOX2Q8IUF8 465 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 ABRAQ8N0Z2 381 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 ANKLE1Q8NAG6 615 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 GMCL1P1Q8NEA9 526 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 FLRT1Q9NZU1 646 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 FEM1BQ9UK73 627 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 STX8Q9UNK0 236 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 PARP14Q460N5 1801 aa20.41■□□□□ 0.86
PHRF1-204ENST00000532550 ORC4O43929 436 aa20.4■□□□□ 0.86
PHRF1-204ENST00000532550 BMP3P12645 472 aa20.4■□□□□ 0.86
PHRF1-204ENST00000532550 CCND3P30281 292 aaPredicted RBP20.4■□□□□ 0.86
PHRF1-204ENST00000532550 COPB2P35606 906 aa20.4■□□□□ 0.86
PHRF1-204ENST00000532550 PAWRQ96IZ0 340 aaKnown RBP20.4■□□□□ 0.86
PHRF1-204ENST00000532550 ISY1Q9ULR0 285 aaKnown RBP20.4■□□□□ 0.86
PHRF1-204ENST00000532550 ZNFX1Q9P2E3 1918 aaKnown RBP20.39■□□□□ 0.86
PHRF1-204ENST00000532550 COL11A1P12107 1806 aaPredicted RBP20.39■□□□□ 0.86
PHRF1-204ENST00000532550 A0A0G2JMZ2 1700 aa20.39■□□□□ 0.86
PHRF1-204ENST00000532550 ZMYM6O95789 1325 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 FGRP09769 529 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 RRP12Q5JTH9 1297 aaKnown RBP20.39■□□□□ 0.85
PHRF1-204ENST00000532550 NECAB2Q7Z6G3 386 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 REPS2Q8NFH8 660 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 KIFC2Q96AC6 838 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 MMP19Q99542 508 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 IL17RBQ9NRM6 502 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 OGDHLQ9ULD0 1010 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 TACC3Q9Y6A5 838 aa20.39■□□□□ 0.85
PHRF1-204ENST00000532550 COBLO75128 1261 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 PDE4AP27815 886 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 CNGA1P29973 690 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 CYP2C19P33261 490 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 HAND2P61296 217 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 KCTD2Q14681 263 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 OLFML2BQ68BL8 750 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 MFSD6Q6ZSS7 791 aa20.38■□□□□ 0.85
PHRF1-204ENST00000532550 TEX13BQ9BXU2 312 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms