RNA–Protein interactions for RNA: ENST00000532268.1

SRPRA-207, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 829 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-207ENST00000532268 PIBF1Q8WXW3 757 aa11.09□□□□□ -0.63
SRPRA-207ENST00000532268 DDX11Q96FC9 970 aa11.09□□□□□ -0.63
SRPRA-207ENST00000532268 NUP88Q99567 741 aaPredicted RBP11.09□□□□□ -0.63
SRPRA-207ENST00000532268 SLC26A6Q9BXS9 759 aa11.09□□□□□ -0.63
SRPRA-207ENST00000532268 VCPKMTQ9H867 229 aa11.09□□□□□ -0.63
SRPRA-207ENST00000532268 ABT1Q9ULW3 272 aaKnown RBP11.09□□□□□ -0.63
SRPRA-207ENST00000532268 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
SRPRA-207ENST00000532268 ATAD5Q96QE3 1844 aa11.09□□□□□ -0.63
SRPRA-207ENST00000532268 PAPPA2Q9BXP8 1791 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 PTPDC1A2A3K4 754 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 KLRF2D3W0D1 207 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 PLEKHA8P1O95397 391 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 PDHBP11177 359 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 BMP3P12645 472 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 CDC27P30260 824 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 FOSBP53539 338 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 HMGCS2P54868 508 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 PPATQ06203 517 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 SSRP1Q08945 709 aaKnown RBP11.08□□□□□ -0.64
SRPRA-207ENST00000532268 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
SRPRA-207ENST00000532268 LDLRAD1Q5T700 205 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 GADL1Q6ZQY3 521 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 PAXIP1Q6ZW49 1069 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-207ENST00000532268 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 FAM184AQ8NB25 1140 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 WDR18Q9BV38 432 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 TANGO6Q9C0B7 1094 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 KIF3AQ9Y496 699 aa11.08□□□□□ -0.64
SRPRA-207ENST00000532268 GREB1LQ9C091 1923 aaPredicted RBP11.07□□□□□ -0.64
SRPRA-207ENST00000532268 SPDYE5A6NIY4 337 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 C19orf81C9J6K1 198 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 JAK2O60674 1132 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 GJB2P29033 226 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 BACE1P56817 501 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
SRPRA-207ENST00000532268 ZNF543Q08ER8 600 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 ST3GAL1Q11201 340 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 PPIL2Q13356 520 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 DGKZQ13574 1117 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 CUL4AQ13619 759 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 DEFB115Q30KQ5 88 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 TMTC3Q6ZXV5 915 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 PHKBQ93100 1093 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 INTS4Q96HW7 963 aaKnown RBP11.07□□□□□ -0.64
SRPRA-207ENST00000532268 GMCL1Q96IK5 515 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 MAP3K14Q99558 947 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 LZTS2Q9BRK4 669 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 LLPHQ9BRT6 129 aaKnown RBP11.07□□□□□ -0.64
SRPRA-207ENST00000532268 UBA5Q9GZZ9 404 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 CPVLQ9H3G5 476 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 ORC3Q9UBD5 711 aaPredicted RBP11.07□□□□□ -0.64
SRPRA-207ENST00000532268 MAD2L2Q9UI95 211 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 SYNPO2Q9UMS6 1093 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 AFG3L2Q9Y4W6 797 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 MYH4Q9Y623 1939 aa11.07□□□□□ -0.64
SRPRA-207ENST00000532268 PALM3A6NDB9 673 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 UNCXA6NJT0 531 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 RASSF10A6NK89 507 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 WDR46O15213 610 aaKnown RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 IFNAR1P17181 557 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 SLC16A2P36021 539 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 ZNF157P51786 506 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 GRM1Q13255 1194 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 TTBK2Q6IQ55 1244 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 SRBD1Q8N5C6 995 aaKnown RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 JMYQ8N9B5 988 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 NSUN7Q8NE18 718 aaKnown RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 LPAR1Q92633 364 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 WNK4Q96J92 1243 aa11.06□□□□□ -0.64
SRPRA-207ENST00000532268 RPAP3Q9H6T3 665 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 FAM217BQ9NTX9 383 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 SEC63Q9UGP8 760 aaKnown RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 CTDP1Q9Y5B0 961 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-207ENST00000532268 NID2Q14112 1375 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 OTOFQ9HC10 1997 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 hCG_1642624A0A1W2PR95 340 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 CXCL11O14625 94 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 IRF6O14896 467 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 SNHG28P0DPA3 235 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 VCAM1P19320 739 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 SNAPC2Q13487 334 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 SYDE2Q5VT97 1194 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 SAPCD2Q86UD0 394 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 CHURC1Q8WUH1 139 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 RRP36Q96EU6 259 aaKnown RBP11.05□□□□□ -0.64
SRPRA-207ENST00000532268 HHIPL1Q96JK4 782 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 EMILIN3Q9NT22 766 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 TLL2Q9Y6L7 1015 aa11.05□□□□□ -0.64
SRPRA-207ENST00000532268 V9GY48 417 aaPredicted RBP11.05□□□□□ -0.64
SRPRA-207ENST00000532268 H3BQV1 296 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 FLOT1O75955 427 aa11.04□□□□□ -0.64
SRPRA-207ENST00000532268 DEXIO95424 95 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms