RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 KMT5BQ4FZB7 885 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 SPRYD7Q5W111 196 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZSCAN25Q6NSZ9 544 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 SH3BP5LQ7L8J4 393 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 MAPKAPK5Q8IW41 473 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 SMC5Q8IY18 1101 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 OTUD7AQ8TE49 926 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 TGFBRAP1Q8WUH2 860 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 DHX38Q92620 1227 aaKnown RBP6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZIC5Q96T25 663 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 BRINP2Q9C0B6 783 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 OSBPL5Q9H0X9 879 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 ELP3Q9H9T3 547 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZNF532Q9HCE3 1301 aa6.95□□□□□ -1.3
HMGB1P42-201ENST00000532126 ECM29Q5VYK3 1845 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 CEP350Q5VT06 3117 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 MANSC4A6NHS7 340 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 FOXN1O15353 648 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 RNF40O75150 1001 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 GLRX3O76003 335 aaKnown RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZBTB48P10074 688 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 ADD2P35612 726 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 USP5P45974 858 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 CTCFP49711 727 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 PSEN2P49810 448 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 DYNLL1P63167 89 aaKnown RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 SREBF2Q12772 1141 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 Q3C1V9 767 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 MAMSTRQ6ZN01 415 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 KCNB2Q92953 911 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZKSCAN4Q969J2 545 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 OPTNQ96CV9 577 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 WNK4Q96J92 1243 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 SLC4A5Q9BY07 1137 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 DHX36Q9H2U1 1008 aaKnown RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 DNAAF2Q9NVR5 837 aaKnown RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 BCCIPQ9P287 314 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZNF112Q9UJU3 913 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 POLR2AP24928 1970 aaKnown RBP6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 FLT1P17948 1338 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 ATRNL1Q5VV63 1379 aa6.94□□□□□ -1.3
HMGB1P42-201ENST00000532126 LOC102724159A0A0B4J2E5 919 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 TCRBV5S4A2TA0A5A2 114 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 PRMT3O60678 531 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 HLA-DOAP06340 250 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 INPP5BP32019 993 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 INHBEP58166 350 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 MAP3K10Q02779 954 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 NUCB1Q02818 461 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 PWP2Q15269 919 aaKnown RBP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 UBE3CQ15386 1083 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 LRRFIP1Q32MZ4 808 aaKnown RBP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 RNF187Q5TA31 235 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 METTL16Q86W50 562 aaKnown RBP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 CHD1LQ86WJ1 897 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 TICAM2Q86XR7 235 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 ERO1BQ86YB8 467 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 KBTBD3Q8NAB2 608 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 PLPP7Q8NBV4 271 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 FAM174AQ8TBP5 190 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 PI4K2BQ8TCG2 481 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 RIOK1Q9BRS2 568 aaKnown RBP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 CRNKL1Q9BZJ0 848 aaKnown RBP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 ANO2Q9NQ90 1003 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 PICK1Q9NRD5 415 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 SAGE1Q9NXZ1 904 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 PI4KBQ9UBF8 816 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 STAP2Q9UGK3 403 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 SAP30BPQ9UHR5 308 aaKnown RBP6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 PALD1Q9ULE6 856 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 SNCAIPQ9Y6H5 919 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 THSD7BQ9C0I4 1608 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 AKAP11Q9UKA4 1901 aa6.93□□□□□ -1.3
HMGB1P42-201ENST00000532126 MAST2Q6P0Q8 1798 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 COL2A1P02458 1487 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 PHF20L1A8MW92 1017 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 RNF113AO15541 343 aaKnown RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 CTNND1O60716 968 aaKnown RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 TRPA1O75762 1119 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 MBD4O95243 580 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 FMNL1O95466 1100 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 CHGBP05060 677 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 ZFYP08048 801 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 SCNN1AP37088 669 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 TM4SF4P48230 202 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 LBX1P52954 281 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 PDE1AP54750 535 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 PPATQ06203 517 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 NOL9Q5SY16 702 aaKnown RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 MORN1Q5T089 497 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 LYPD8Q6UX82 237 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 TTC6Q86TZ1 520 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 FOXP4Q8IVH2 680 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 SCYL3Q8IZE3 742 aa6.92□□□□□ -1.3
HMGB1P42-201ENST00000532126 LCORLQ8N3X6 602 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms