RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	RPS6KB1	P23443	525 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ZNF132	P52740	706 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	COPA	P53621	1224 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	FCGRT	P55899	365 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CLC	Q05315	142 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MTFR1	Q15390	333 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CWF19L2	Q2TBE0	894 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TLDC1	Q6P9B6	456 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	POTEB	Q6S5H4	581 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	XKR5	Q6UX68	686 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	C4orf50	Q6ZRC1	276 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CATIP	Q7Z7H3	387 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TTC6	Q86TZ1	520 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	REXO1	Q8N1G1	1221 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CENPT	Q96BT3	561 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CCDC138	Q96M89	665 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	IWS1	Q96ST2	819 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TSPY26P	Q9H489	355 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	OSBPL3	Q9H4L5	887 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	AGO4	Q9HCK5	861 aa	Known RBP	6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PDLIM7	Q9NR12	457 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	LRRC4B	Q9NT99	713 aa		6.13	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SERTM1	A2A2V5	107 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	FZD9	O00144	591 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	EYA2	O00167	538 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ACTN4	O43707	911 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CELA3A	P09093	270 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PYGM	P11217	842 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RILPL1	Q5EBL4	403 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PPP4R3B	Q5MIZ7	849 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	AGMO	Q6ZNB7	445 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TRIM42	Q8IWZ5	723 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SLFN12	Q8IYM2	578 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	HDAC2	Q92769	488 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SMARCC1	Q92922	1105 aa	Predicted RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MAP3K14	Q99558	947 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CDC6	Q99741	560 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	WDR12	Q9GZL7	423 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	UNC45A	Q9H3U1	944 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	NKIRAS2	Q9NYR9	191 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	EML1	O00423	815 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	KPNA6	O60684	536 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MT-CO1	P00395	513 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	BPI	P17213	487 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PPFIA1	Q13136	1202 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PLA2G4E	Q3MJ16	856 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CPLX2	Q6PUV4	134 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MYCT1	Q8N699	235 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	DDX11	Q96FC9	970 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RSRC1	Q96IZ7	334 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	BARD1	Q99728	777 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SLC26A6	Q9BXS9	759 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	DBNDD1	Q9H9R9	158 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	EFCC1	Q9HA90	598 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	DNM3	Q9UQ16	869 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	APOBEC2	Q9Y235	224 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CRYL1	Q9Y2S2	319 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	USP3	Q9Y6I4	520 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TRIM75P	A6NK02	468 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	HIRA	P54198	1017 aa	Predicted RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ERVK-9	P63128	1117 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PLIN5	Q00G26	463 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PPP2R5C	Q13362	524 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PLCB4	Q15147	1175 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PLBD1	Q6P4A8	553 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ZNF438	Q7Z4V0	828 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	KHSRP	Q92945	711 aa	Known RBP eCLIP	6.12	□□□□□ -1.43	2e-12	■■■□□ 17
ECHDC1-222	ENST00000531967	STAC3	Q96MF2	364 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SEC62	Q99442	399 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CARD10	Q9BWT7	1032 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ABCG4	Q9H172	646 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	UNC93B1	Q9H1C4	597 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	BRMS1	Q9HCU9	246 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PPARGC1A	Q9UBK2	798 aa	Known RBP	6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RABL2B	Q9UNT1	228 aa		6.12	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TRIM64	A6NGJ6	449 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TRIM64B	A6NI03	449 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	LRRC10B	A6NIK2	292 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967		A6NNZ2	444 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TPP1	O14773	563 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	AREL1	O15033	823 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SUSD5	O60279	629 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	ZEB2	O60315	1214 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	RNF40	O75150	1001 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	KIF5B	P33176	963 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SMTN	P53814	917 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	CACNB2	Q08289	660 aa	Predicted RBP	6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SMC1A	Q14683	1233 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	PCBP2	Q15366	365 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	UVSSA	Q2YD98	709 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	INAVA	Q3KP66	663 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SNX21	Q969T3	373 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	HSPBAP1	Q96EW2	488 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	OXCT2	Q9BYC2	517 aa	Predicted RBP	6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	MRPL9	Q9BYD2	267 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TOPORS	Q9NS56	1045 aa	Predicted RBP	6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	XPO7	Q9UIA9	1087 aa	Known RBP	6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	SNCAIP	Q9Y6H5	919 aa		6.11	□□□□□ -1.43
ECHDC1-222	ENST00000531967	TSPY2	A6NKD2	308 aa		6.11	□□□□□ -1.43

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