RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 FAM83BQ5T0W9 1011 aa26.6■■□□□ 1.85
TRAPPC4-210ENST00000531290 OLFML2BQ68BL8 750 aa26.6■■□□□ 1.85
TRAPPC4-210ENST00000531290 IFNL3Q8IZI9 196 aa26.6■■□□□ 1.85
TRAPPC4-210ENST00000531290 EPB41L4AQ9HCS5 686 aaPredicted RBP26.6■■□□□ 1.85
TRAPPC4-210ENST00000531290 NYAP2Q9P242 653 aa26.6■■□□□ 1.85
TRAPPC4-210ENST00000531290 ADAMTS5Q9UNA0 930 aa26.6■■□□□ 1.85
TRAPPC4-210ENST00000531290 COBLO75128 1261 aa26.59■■□□□ 1.85
TRAPPC4-210ENST00000531290 ANKRD45Q5TZF3 282 aa26.59■■□□□ 1.85
TRAPPC4-210ENST00000531290 CRBNQ96SW2 442 aa26.59■■□□□ 1.85
TRAPPC4-210ENST00000531290 PPP1R9AQ9ULJ8 1098 aa26.59■■□□□ 1.85
TRAPPC4-210ENST00000531290 ZMYND8Q9ULU4 1186 aaPredicted RBP26.59■■□□□ 1.85
TRAPPC4-210ENST00000531290 COL6A1P12109 1028 aa26.58■■□□□ 1.85
TRAPPC4-210ENST00000531290 SEC62Q99442 399 aaKnown RBP26.58■■□□□ 1.85
TRAPPC4-210ENST00000531290 CLIP2Q9UDT6 1046 aa26.58■■□□□ 1.85
TRAPPC4-210ENST00000531290 PFASO15067 1338 aa26.58■■□□□ 1.85
TRAPPC4-210ENST00000531290 ROBO3Q96MS0 1386 aa26.58■■□□□ 1.84
TRAPPC4-210ENST00000531290 A0A1W2PPC1 479 aa26.57■■□□□ 1.84
TRAPPC4-210ENST00000531290 F5H6K3 240 aa26.57■■□□□ 1.84
TRAPPC4-210ENST00000531290 VWA5AO00534 786 aa26.57■■□□□ 1.84
TRAPPC4-210ENST00000531290 PRDM1O75626 825 aa26.57■■□□□ 1.84
TRAPPC4-210ENST00000531290 STAT3P40763 770 aa26.57■■□□□ 1.84
TRAPPC4-210ENST00000531290 KLRC3Q07444 240 aa26.57■■□□□ 1.84
TRAPPC4-210ENST00000531290 IGHA2P01877 340 aa26.56■■□□□ 1.84
TRAPPC4-210ENST00000531290 SLC3A2P08195 630 aaKnown RBP26.56■■□□□ 1.84
TRAPPC4-210ENST00000531290 RIOX2Q8IUF8 465 aa26.56■■□□□ 1.84
TRAPPC4-210ENST00000531290 TRPV1Q8NER1 839 aa26.56■■□□□ 1.84
TRAPPC4-210ENST00000531290 MMP19Q99542 508 aa26.56■■□□□ 1.84
TRAPPC4-210ENST00000531290 NAPBQ9H115 298 aa26.56■■□□□ 1.84
TRAPPC4-210ENST00000531290 CYBAP13498 195 aa26.55■■□□□ 1.84
TRAPPC4-210ENST00000531290 COPB2P35606 906 aa26.55■■□□□ 1.84
TRAPPC4-210ENST00000531290 PDE4BQ07343 736 aa26.55■■□□□ 1.84
TRAPPC4-210ENST00000531290 KCTD2Q14681 263 aa26.55■■□□□ 1.84
TRAPPC4-210ENST00000531290 ZMYM1Q5SVZ6 1142 aa26.55■■□□□ 1.84
TRAPPC4-210ENST00000531290 NUP88Q99567 741 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC4-210ENST00000531290 SLF1Q9BQI6 1058 aa26.55■■□□□ 1.84
TRAPPC4-210ENST00000531290 NDUFB10O96000 172 aa26.54■■□□□ 1.84
TRAPPC4-210ENST00000531290 SYN1P17600 705 aa26.54■■□□□ 1.84
TRAPPC4-210ENST00000531290 MAML3Q96JK9 1138 aa26.54■■□□□ 1.84
TRAPPC4-210ENST00000531290 SENP6Q9GZR1 1112 aaPredicted RBP26.54■■□□□ 1.84
TRAPPC4-210ENST00000531290 PRPF38AQ8NAV1 312 aaKnown RBP26.53■■□□□ 1.84
TRAPPC4-210ENST00000531290 ARRDC4Q8NCT1 418 aa26.53■■□□□ 1.84
TRAPPC4-210ENST00000531290 GDF15Q99988 308 aa26.53■■□□□ 1.84
TRAPPC4-210ENST00000531290 CTDP1Q9Y5B0 961 aaPredicted RBP26.53■■□□□ 1.84
TRAPPC4-210ENST00000531290 IGKV6D-41A0A0C4DH26 115 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 DNM1LO00429 736 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 SEPT4O43236 478 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 TSPY3P0CV98 308 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 TSPY8P0CW00 308 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 RANBP2P49792 3224 aaKnown RBP26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 HDAC1Q13547 482 aaPredicted RBP26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 LRRC26Q2I0M4 334 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 MKL1Q969V6 931 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 CEP95Q96GE4 821 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 MTMR4Q9NYA4 1195 aa26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 BAZ2AQ9UIF9 1905 aaKnown RBP26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 ZNF214Q9UL59 606 aaPredicted RBP26.52■■□□□ 1.84
TRAPPC4-210ENST00000531290 TRIOBPQ9H2D6 2365 aa26.51■■□□□ 1.84
TRAPPC4-210ENST00000531290 TTLL1O95922 423 aa26.51■■□□□ 1.83
TRAPPC4-210ENST00000531290 BMP8BP34820 402 aa26.51■■□□□ 1.83
TRAPPC4-210ENST00000531290 PPARAQ07869 468 aa26.51■■□□□ 1.83
TRAPPC4-210ENST00000531290 PRAMEF19Q5SWL8 479 aa26.51■■□□□ 1.83
TRAPPC4-210ENST00000531290 REPS2Q8NFH8 660 aa26.51■■□□□ 1.83
TRAPPC4-210ENST00000531290 ZBED4O75132 1171 aa26.5■■□□□ 1.83
TRAPPC4-210ENST00000531290 PGK2P07205 417 aa26.5■■□□□ 1.83
TRAPPC4-210ENST00000531290 ANO1Q5XXA6 986 aa26.5■■□□□ 1.83
TRAPPC4-210ENST00000531290 NEDD1Q8NHV4 660 aa26.5■■□□□ 1.83
TRAPPC4-210ENST00000531290 EVI5LQ96CN4 794 aa26.5■■□□□ 1.83
TRAPPC4-210ENST00000531290 TEX13BQ9BXU2 312 aa26.5■■□□□ 1.83
TRAPPC4-210ENST00000531290 SYNPO2Q9UMS6 1093 aa26.5■■□□□ 1.83
TRAPPC4-210ENST00000531290 SALL3Q9BXA9 1300 aa26.49■■□□□ 1.83
TRAPPC4-210ENST00000531290 MYCNP04198 464 aaPredicted RBP26.49■■□□□ 1.83
TRAPPC4-210ENST00000531290 MAGEA10P43363 369 aaPredicted RBP26.49■■□□□ 1.83
TRAPPC4-210ENST00000531290 TFAP4Q01664 338 aa26.49■■□□□ 1.83
TRAPPC4-210ENST00000531290 FAM47AQ5JRC9 791 aa26.49■■□□□ 1.83
TRAPPC4-210ENST00000531290 DIS3Q9Y2L1 958 aaKnown RBP26.49■■□□□ 1.83
TRAPPC4-210ENST00000531290 SLC4A3P48751 1232 aa26.48■■□□□ 1.83
TRAPPC4-210ENST00000531290 GJC2Q5T442 439 aaPredicted RBP26.48■■□□□ 1.83
TRAPPC4-210ENST00000531290 SNRNP48Q6IEG0 339 aaKnown RBP26.48■■□□□ 1.83
TRAPPC4-210ENST00000531290 LRRC47Q8N1G4 583 aaKnown RBP26.48■■□□□ 1.83
TRAPPC4-210ENST00000531290 KIFC2Q96AC6 838 aa26.48■■□□□ 1.83
TRAPPC4-210ENST00000531290 NRBP1Q9UHY1 535 aa26.48■■□□□ 1.83
TRAPPC4-210ENST00000531290 FEM1BQ9UK73 627 aa26.48■■□□□ 1.83
TRAPPC4-210ENST00000531290 KBTBD13C9JR72 458 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 ATN1P54259 1190 aaPredicted RBP26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 PDE1AP54750 535 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 AAMPQ13685 434 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 ZNF792Q3KQV3 632 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 SLFN13Q68D06 897 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 CCDC129Q6ZRS4 1044 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 CPXCR1Q8N123 301 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 GMCL1P1Q8NEA9 526 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 TINF2Q9BSI4 451 aa26.47■■□□□ 1.83
TRAPPC4-210ENST00000531290 MYH7P12883 1935 aa26.46■■□□□ 1.83
TRAPPC4-210ENST00000531290 PPP4R3BQ5MIZ7 849 aa26.46■■□□□ 1.83
TRAPPC4-210ENST00000531290 DDX11Q96FC9 970 aa26.46■■□□□ 1.83
TRAPPC4-210ENST00000531290 ISY1Q9ULR0 285 aaKnown RBP26.46■■□□□ 1.83
TRAPPC4-210ENST00000531290 BMP3P12645 472 aa26.45■■□□□ 1.82
TRAPPC4-210ENST00000531290 UBE2OQ9C0C9 1292 aaKnown RBP26.45■■□□□ 1.82
TRAPPC4-210ENST00000531290 HELLSQ9NRZ9 838 aa26.45■■□□□ 1.82
TRAPPC4-210ENST00000531290 A0A0G2JMZ2 1700 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms