RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 SNX17Q15036 470 aa16.06■□□□□ 0.16
HIF3A-214ENST00000531043 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
HIF3A-214ENST00000531043 MB21D1Q8N884 522 aa16.06■□□□□ 0.16
HIF3A-214ENST00000531043 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
HIF3A-214ENST00000531043 MROH8Q9H579 483 aa16.06■□□□□ 0.16
HIF3A-214ENST00000531043 PDLIM7Q9NR12 457 aa16.06■□□□□ 0.16
HIF3A-214ENST00000531043 VCANP13611 3396 aa16.06■□□□□ 0.16
HIF3A-214ENST00000531043 USP17L12C9JPN9 530 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 USP17L21D6R901 530 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 IFIT2P09913 472 aaKnown RBP16.05■□□□□ 0.16
HIF3A-214ENST00000531043 EEF2P13639 858 aaKnown RBP16.05■□□□□ 0.16
HIF3A-214ENST00000531043 HSP90AB4PQ58FF6 505 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 C12orf60Q5U649 245 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.05■□□□□ 0.16
HIF3A-214ENST00000531043 LENG1Q96BZ8 264 aaPredicted RBP16.05■□□□□ 0.16
HIF3A-214ENST00000531043 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 PAG1Q9NWQ8 432 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 PRKAG2Q9UGJ0 569 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 SWAP70Q9UH65 585 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 MCM3APO60318 1980 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 CDH23Q9H251 3354 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 TTC28Q96AY4 2481 aa16.05■□□□□ 0.16
HIF3A-214ENST00000531043 PGK1P00558 417 aa16.04■□□□□ 0.16
HIF3A-214ENST00000531043 EPHB4P54760 987 aa16.04■□□□□ 0.16
HIF3A-214ENST00000531043 TLE2Q04725 743 aa16.04■□□□□ 0.16
HIF3A-214ENST00000531043 ABRAQ8N0Z2 381 aa16.04■□□□□ 0.16
HIF3A-214ENST00000531043 CDX2Q99626 313 aaPredicted RBP16.04■□□□□ 0.16
HIF3A-214ENST00000531043 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.04■□□□□ 0.16
HIF3A-214ENST00000531043 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
HIF3A-214ENST00000531043 WDR46O15213 610 aaKnown RBP16.03■□□□□ 0.16
HIF3A-214ENST00000531043 FCER1AP12319 257 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 ZNF697Q5TEC3 545 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 C16orf86Q6ZW13 317 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 MIER1Q8N108 512 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 REPS2Q8NFH8 660 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 MMP19Q99542 508 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 TTYH1Q9H313 450 aaPredicted RBP16.03■□□□□ 0.16
HIF3A-214ENST00000531043 ATP8A2Q9NTI2 1148 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 COG6Q9Y2V7 657 aa16.03■□□□□ 0.16
HIF3A-214ENST00000531043 GREB1LQ9C091 1923 aaPredicted RBP16.02■□□□□ 0.16
HIF3A-214ENST00000531043 ATP5JP18859 108 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 ZNF792Q3KQV3 632 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 FAM83BQ5T0W9 1011 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 CTR9Q6PD62 1173 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 NUP88Q99567 741 aaPredicted RBP16.02■□□□□ 0.16
HIF3A-214ENST00000531043 HAUS7Q99871 368 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 SEMA6BQ9H3T3 888 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 XPNPEP3Q9NQH7 507 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 ZBTB40Q9NUA8 1239 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 SLC5A4Q9NY91 659 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 PHF24Q9UPV7 400 aa16.02■□□□□ 0.16
HIF3A-214ENST00000531043 VWA5AO00534 786 aa16.01■□□□□ 0.15
HIF3A-214ENST00000531043 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-214ENST00000531043 RIOX2Q8IUF8 465 aa16.01■□□□□ 0.15
HIF3A-214ENST00000531043 STK11IPQ8N1F8 1099 aa16.01■□□□□ 0.15
HIF3A-214ENST00000531043 CCDC17Q96LX7 622 aa16.01■□□□□ 0.15
HIF3A-214ENST00000531043 PUS7LQ9H0K6 701 aaKnown RBP16.01■□□□□ 0.15
HIF3A-214ENST00000531043 ZNF214Q9UL59 606 aaPredicted RBP16.01■□□□□ 0.15
HIF3A-214ENST00000531043 PPP1R9AQ9ULJ8 1098 aa16.01■□□□□ 0.15
HIF3A-214ENST00000531043 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
HIF3A-214ENST00000531043 ZBED9Q6R2W3 1325 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 RAD21O60216 631 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
HIF3A-214ENST00000531043 SLC25A27O95847 323 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 RARBP10826 455 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 STAT3P40763 770 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
HIF3A-214ENST00000531043 C1orf53Q5VUE5 145 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
HIF3A-214ENST00000531043 MYLIPQ8WY64 445 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 TINF2Q9BSI4 451 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 SH2D4AQ9H788 454 aa16■□□□□ 0.15
HIF3A-214ENST00000531043 PQBP1O60828 265 aaKnown RBP15.99■□□□□ 0.15
HIF3A-214ENST00000531043 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
HIF3A-214ENST00000531043 KANSL2Q9H9L4 492 aa15.99■□□□□ 0.15
HIF3A-214ENST00000531043 RIPK3Q9Y572 518 aa15.99■□□□□ 0.15
HIF3A-214ENST00000531043 MYH4Q9Y623 1939 aa15.98■□□□□ 0.15
HIF3A-214ENST00000531043 A0A1W2PQ45 241 aaPredicted RBP15.98■□□□□ 0.15
HIF3A-214ENST00000531043 A0A1W2PQY0 241 aa15.98■□□□□ 0.15
HIF3A-214ENST00000531043 MYADML2A6NDP7 307 aa15.98■□□□□ 0.15
HIF3A-214ENST00000531043 ADAMTS4O75173 837 aa15.98■□□□□ 0.15
HIF3A-214ENST00000531043 UBE3CQ15386 1083 aa15.98■□□□□ 0.15
HIF3A-214ENST00000531043 MAFAQ8NHW3 353 aaPredicted RBP15.98■□□□□ 0.15
HIF3A-214ENST00000531043 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.15
HIF3A-214ENST00000531043 NRBP1Q9UHY1 535 aa15.98■□□□□ 0.15
HIF3A-214ENST00000531043 KIAA0355O15063 1070 aa15.97■□□□□ 0.15
HIF3A-214ENST00000531043 HMMRO75330 724 aa15.97■□□□□ 0.15
HIF3A-214ENST00000531043 SNAI1O95863 264 aaPredicted RBP15.97■□□□□ 0.15
HIF3A-214ENST00000531043 CLTBP09497 229 aa15.97■□□□□ 0.15
HIF3A-214ENST00000531043 RASA1P20936 1047 aa15.97■□□□□ 0.15
HIF3A-214ENST00000531043 SMAD3P84022 425 aaKnown RBP15.97■□□□□ 0.15
HIF3A-214ENST00000531043 KCTD2Q14681 263 aa15.97■□□□□ 0.15
HIF3A-214ENST00000531043 STRBPQ96SI9 672 aaKnown RBP15.97■□□□□ 0.15
HIF3A-214ENST00000531043 GOPCQ9HD26 462 aa15.97■□□□□ 0.15
HIF3A-214ENST00000531043 DIS3Q9Y2L1 958 aaKnown RBP15.97■□□□□ 0.15
HIF3A-214ENST00000531043 TACC3Q9Y6A5 838 aa15.97■□□□□ 0.15
HIF3A-214ENST00000531043 NDUFB10O96000 172 aa15.96■□□□□ 0.15
HIF3A-214ENST00000531043 RNF180Q86T96 592 aa15.96■□□□□ 0.15
HIF3A-214ENST00000531043 KLHDC9Q8NEP7 349 aa15.96■□□□□ 0.15
HIF3A-214ENST00000531043 RNPC3Q96LT9 517 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms