RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 TMEM179Q6ZVK1 233 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 MICU3Q86XE3 530 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 STK11IPQ8N1F8 1099 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 WNT2BQ93097 391 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 KANSL2Q9H9L4 492 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 VEZTQ9HBM0 779 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 CABP5Q9NP86 173 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 PCDHAC2Q9Y5I4 1007 aa11.47□□□□□ -0.57
CTNND1-228ENST00000531007 CNTNAP1P78357 1384 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 CLRN2A0PK11 232 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 TCP10L2B9ZVM9 353 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 GOLGA6L22H0YM25 854 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 CACNB3P54284 484 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 PRSS12P56730 875 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 CCT2P78371 535 aaKnown RBP11.46□□□□□ -0.57
CTNND1-228ENST00000531007 NBPF9Q3BBW0 867 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 SH3BP5LQ7L8J4 393 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 PACS2Q86VP3 889 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 PNMA1Q8ND90 353 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 RNF26Q9BY78 433 aaPredicted RBP11.46□□□□□ -0.57
CTNND1-228ENST00000531007 ZSCAN16Q9H4T2 348 aaPredicted RBP11.46□□□□□ -0.57
CTNND1-228ENST00000531007 CDHR5Q9HBB8 845 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 IL17RBQ9NRM6 502 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
CTNND1-228ENST00000531007 MTMR4Q9NYA4 1195 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 STX8Q9UNK0 236 aa11.46□□□□□ -0.57
CTNND1-228ENST00000531007 MYH8P13535 1937 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 SMIM22K7EJ46 135 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 DEXIO95424 95 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 CTDNEP1O95476 244 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 ZSCAN22P10073 491 aaPredicted RBP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 XBP1P17861 261 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 SSRP1Q08945 709 aaKnown RBP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 NTRK3Q16288 839 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 ABCB5Q2M3G0 1257 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 SLC4A8Q2Y0W8 1093 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 DCAF15Q66K64 600 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 ZFPM1Q8IX07 1006 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 ZC3H15Q8WU90 426 aaKnown RBP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 NUP133Q8WUM0 1156 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 MKL1Q969V6 931 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 CEP95Q96GE4 821 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 TMEM47Q9BQJ4 181 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 NYAP2Q9P242 653 aa11.45□□□□□ -0.58
CTNND1-228ENST00000531007 GOLGB1Q14789 3259 aaKnown RBP11.45□□□□□ -0.58
CTNND1-228ENST00000531007 IQCA1LA6NCM1 817 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 H3BQV1 296 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 PRPF3O43395 683 aaKnown RBP11.44□□□□□ -0.58
CTNND1-228ENST00000531007 AKR1B1P15121 316 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 ADD1P35611 737 aaKnown RBP11.44□□□□□ -0.58
CTNND1-228ENST00000531007 RASA3Q14644 834 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 GRM4Q14833 912 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 IFFO2Q5TF58 517 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 THSD4Q6ZMP0 1018 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 USP50Q70EL3 339 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-228ENST00000531007 ANKK1Q8NFD2 765 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 TNPO1Q92973 898 aaKnown RBP11.44□□□□□ -0.58
CTNND1-228ENST00000531007 DNAJC18Q9H819 358 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
CTNND1-228ENST00000531007 FAM217BQ9NTX9 383 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-228ENST00000531007 ORC3Q9UBD5 711 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-228ENST00000531007 PGAP2Q9UHJ9 254 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 TSKSQ9UJT2 592 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 UTRNP46939 3433 aa11.44□□□□□ -0.58
CTNND1-228ENST00000531007 GREB1LQ9C091 1923 aaPredicted RBP11.43□□□□□ -0.58
CTNND1-228ENST00000531007 GLTPD2A6NH11 291 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 DDX11L8A8MPP1 907 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 NMT2O60551 498 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 JAK2O60674 1132 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 ASNSP08243 561 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 CDC27P30260 824 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 TRIM29Q14134 588 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 TBC1D10BQ4KMP7 808 aaPredicted RBP11.43□□□□□ -0.58
CTNND1-228ENST00000531007 ASPRV1Q53RT3 343 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 GPATCH4Q5T3I0 446 aaKnown RBP11.43□□□□□ -0.58
CTNND1-228ENST00000531007 ATL3Q6DD88 541 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 SAMD7Q7Z3H4 446 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTNND1-228ENST00000531007 DEFB129Q9H1M3 183 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 SH2D4AQ9H788 454 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 SEPT9Q9UHD8 586 aaPredicted RBP11.43□□□□□ -0.58
CTNND1-228ENST00000531007 MTMR6Q9Y217 621 aa11.43□□□□□ -0.58
CTNND1-228ENST00000531007 SIPA1L1O43166 1804 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
CTNND1-228ENST00000531007 MPHOSPH10O00566 681 aaKnown RBP11.42□□□□□ -0.58
CTNND1-228ENST00000531007 DDNO94850 711 aaPredicted RBP11.42□□□□□ -0.58
CTNND1-228ENST00000531007 F13A1P00488 732 aa11.42□□□□□ -0.58
CTNND1-228ENST00000531007 PARP1P09874 1014 aaKnown RBP11.42□□□□□ -0.58
CTNND1-228ENST00000531007 SNHG28P0DPA3 235 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms