RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 RCSD1Q6JBY9 416 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 FBXO46Q6PJ61 603 aaPredicted RBP14□□□□□ -0.17
LTBP3-219ENST00000530990 CHMP4CQ96CF2 233 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 BTBD7Q9P203 1132 aa14□□□□□ -0.17
LTBP3-219ENST00000530990 MYPNQ86TC9 1320 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 E7EWF7 191 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 SLC27A2O14975 620 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 ARHGEF6Q15052 776 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 PKN2Q16513 984 aaKnown RBP13.99□□□□□ -0.17
LTBP3-219ENST00000530990 Q3C1V9 767 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 CYB5R4Q7L1T6 521 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 IQCA1Q86XH1 822 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 GPRC5AQ8NFJ5 357 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 TMEM47Q9BQJ4 181 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 ZSWIM5Q9P217 1185 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 MTMR7Q9Y216 660 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 PTPN22Q9Y2R2 807 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 RABGAP1Q9Y3P9 1069 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 ZNF236Q9UL36 1845 aa13.99□□□□□ -0.17
LTBP3-219ENST00000530990 TNKSO95271 1327 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 TNPO2O14787 897 aaKnown RBP13.98□□□□□ -0.17
LTBP3-219ENST00000530990 GNRH1P01148 92 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 TOP1P11387 765 aaKnown RBP13.98□□□□□ -0.17
LTBP3-219ENST00000530990 BMP3P12645 472 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 MCCP23508 829 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 PRKCZQ05513 592 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 TRDNQ13061 729 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 NECTIN1Q15223 517 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 CREB3L3Q68CJ9 461 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 ENAHQ8N8S7 591 aaPredicted RBP13.98□□□□□ -0.17
LTBP3-219ENST00000530990 GMCL1Q96IK5 515 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 ZSCAN10Q96SZ4 725 aaPredicted RBP13.98□□□□□ -0.17
LTBP3-219ENST00000530990 SLF1Q9BQI6 1058 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 PORCNQ9H237 461 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 HOXC10Q9NYD6 342 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 SRRDQ9UH36 339 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 ISY1Q9ULR0 285 aaKnown RBP13.98□□□□□ -0.17
LTBP3-219ENST00000530990 PTCH2Q9Y6C5 1203 aa13.98□□□□□ -0.17
LTBP3-219ENST00000530990 SLC1A4P43007 532 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 RALYLQ86SE5 291 aaKnown RBP13.97□□□□□ -0.17
LTBP3-219ENST00000530990 MB21D2Q8IYB1 491 aaPredicted RBP13.97□□□□□ -0.17
LTBP3-219ENST00000530990 MB21D1Q8N884 522 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 NCOA7Q8NI08 942 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 TTC14Q96N46 770 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 GABRQQ9UN88 632 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 ADAMTS5Q9UNA0 930 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 HPS5Q9UPZ3 1129 aa13.97□□□□□ -0.17
LTBP3-219ENST00000530990 TMEM232C9JQI7 657 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 VWA5AO00534 786 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 PDHBP11177 359 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 CCNA1P78396 465 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 COL9A3Q14050 684 aaPredicted RBP13.96□□□□□ -0.17
LTBP3-219ENST00000530990 CCDC96Q2M329 555 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 KCTD1Q719H9 257 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 DGKHQ86XP1 1220 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 DCAF4Q8WV16 495 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 FEM1BQ9UK73 627 aa13.96□□□□□ -0.17
LTBP3-219ENST00000530990 MYH6P13533 1939 aa13.96□□□□□ -0.18
LTBP3-219ENST00000530990 ZNFX1Q9P2E3 1918 aaKnown RBP13.96□□□□□ -0.18
LTBP3-219ENST00000530990 PLXNA1Q9UIW2 1896 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 FRMPD2Q68DX3 1309 aaPredicted RBP13.95□□□□□ -0.18
LTBP3-219ENST00000530990 HOXD10P28358 340 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 MAPK4P31152 587 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 STAT2P52630 851 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 PRMT2P55345 433 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 ANTXR2P58335 489 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 PLS1Q14651 629 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 TMEM132BQ14DG7 1078 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 SEC23AQ15436 765 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 CHST3Q7LGC8 479 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 PNMA1Q8ND90 353 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 REPS2Q8NFH8 660 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 COA7Q96BR5 231 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 MOV10L1Q9BXT6 1211 aaKnown RBP13.95□□□□□ -0.18
LTBP3-219ENST00000530990 SPATC1LQ9H0A9 340 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 ZNF214Q9UL59 606 aaPredicted RBP13.95□□□□□ -0.18
LTBP3-219ENST00000530990 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
LTBP3-219ENST00000530990 CENPFP49454 3210 aa13.95□□□□□ -0.18
LTBP3-219ENST00000530990 REC8O95072 547 aa13.94□□□□□ -0.18
LTBP3-219ENST00000530990 FLT3LGP49771 235 aa13.94□□□□□ -0.18
LTBP3-219ENST00000530990 MLLT1Q03111 559 aaPredicted RBP13.94□□□□□ -0.18
LTBP3-219ENST00000530990 IKQ13123 557 aaPredicted RBP13.94□□□□□ -0.18
LTBP3-219ENST00000530990 IFIT1BQ5T764 474 aaKnown RBP13.94□□□□□ -0.18
LTBP3-219ENST00000530990 WDR78Q5VTH9 848 aa13.94□□□□□ -0.18
LTBP3-219ENST00000530990 RNF20Q5VTR2 975 aa13.94□□□□□ -0.18
LTBP3-219ENST00000530990 FAM160B2Q86V87 743 aa13.94□□□□□ -0.18
LTBP3-219ENST00000530990 CCAR1Q8IX12 1150 aaKnown RBP13.94□□□□□ -0.18
LTBP3-219ENST00000530990 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
LTBP3-219ENST00000530990 RAET1EQ8TD07 263 aa13.94□□□□□ -0.18
LTBP3-219ENST00000530990 ANKS1AQ92625 1134 aa13.94□□□□□ -0.18
LTBP3-219ENST00000530990 SMCHD1A6NHR9 2005 aa13.93□□□□□ -0.18
LTBP3-219ENST00000530990 IFIT3O14879 490 aaKnown RBP13.93□□□□□ -0.18
LTBP3-219ENST00000530990 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
LTBP3-219ENST00000530990 ERCC3P19447 782 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms