RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TGIF2Q9GZN2 237 aa11.2□□□□□ -0.62
CSDE1-213ENST00000530784 TRIT1Q9H3H1 467 aaKnown RBP11.2□□□□□ -0.62
CSDE1-213ENST00000530784 ACBD3Q9H3P7 528 aa11.2□□□□□ -0.62
CSDE1-213ENST00000530784 GPATCH2Q9NW75 528 aa11.2□□□□□ -0.62
CSDE1-213ENST00000530784 EFR3BQ9Y2G0 817 aa11.2□□□□□ -0.62
CSDE1-213ENST00000530784 ESR1P03372 595 aa11.19□□□□□ -0.62
CSDE1-213ENST00000530784 NBPF12Q5TAG4 269 aaPredicted RBP11.19□□□□□ -0.62
CSDE1-213ENST00000530784 SHISA3A0PJX4 238 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 ACRP10323 421 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 ITGB5P18084 799 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 CCNFP41002 786 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 RNF4P78317 190 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 GAB4Q2WGN9 574 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 CCDC81Q6ZN84 652 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 TMPRSS7Q7RTY8 843 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 CREG2Q8IUH2 290 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 TMEM192Q8IY95 271 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 RASGRP4Q8TDF6 673 aa11.18□□□□□ -0.62
CSDE1-213ENST00000530784 ZNF512BQ96KM6 892 aaPredicted RBP11.18□□□□□ -0.62
CSDE1-213ENST00000530784 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
CSDE1-213ENST00000530784 CLEC3AO75596 197 aa11.17□□□□□ -0.62
CSDE1-213ENST00000530784 GJA8P48165 433 aa11.17□□□□□ -0.62
CSDE1-213ENST00000530784 SOX9P48436 509 aa11.17□□□□□ -0.62
CSDE1-213ENST00000530784 COL9A2Q14055 689 aaPredicted RBP11.17□□□□□ -0.62
CSDE1-213ENST00000530784 TSPYL5Q86VY4 417 aaPredicted RBP11.17□□□□□ -0.62
CSDE1-213ENST00000530784 SPATA32Q96LK8 384 aa11.17□□□□□ -0.62
CSDE1-213ENST00000530784 PRG4Q92954 1404 aaPredicted RBP11.17□□□□□ -0.62
CSDE1-213ENST00000530784 INTS3Q68E01 1043 aaKnown RBP11.16□□□□□ -0.62
CSDE1-213ENST00000530784 SLC6A18Q96N87 628 aa11.16□□□□□ -0.62
CSDE1-213ENST00000530784 CCSER2Q9H7U1 834 aa11.16□□□□□ -0.62
CSDE1-213ENST00000530784 RUSC2Q8N2Y8 1516 aa11.15□□□□□ -0.62
CSDE1-213ENST00000530784 TCF3P15923 654 aa11.15□□□□□ -0.62
CSDE1-213ENST00000530784 NBPF9Q3BBW0 867 aa11.15□□□□□ -0.62
CSDE1-213ENST00000530784 RUFY4Q6ZNE9 571 aa11.15□□□□□ -0.62
CSDE1-213ENST00000530784 ATG4DQ86TL0 474 aaPredicted RBP11.15□□□□□ -0.62
CSDE1-213ENST00000530784 RBBP8NLQ8NC74 664 aaPredicted RBP11.15□□□□□ -0.62
CSDE1-213ENST00000530784 DUSP13Q9UII6 198 aa11.15□□□□□ -0.62
CSDE1-213ENST00000530784 PAPLNO95428 1278 aa11.14□□□□□ -0.63
CSDE1-213ENST00000530784 INPP5FQ9Y2H2 1132 aa11.14□□□□□ -0.63
CSDE1-213ENST00000530784 JUNBP17275 347 aaPredicted RBP11.13□□□□□ -0.63
CSDE1-213ENST00000530784 ERCC5P28715 1186 aaPredicted RBP11.13□□□□□ -0.63
CSDE1-213ENST00000530784 NMIQ13287 307 aaPredicted RBP11.13□□□□□ -0.63
CSDE1-213ENST00000530784 SNW1Q13573 536 aaKnown RBP11.13□□□□□ -0.63
CSDE1-213ENST00000530784 CLEC16AQ2KHT3 1053 aa11.13□□□□□ -0.63
CSDE1-213ENST00000530784 LSRQ86X29 649 aaPredicted RBP11.13□□□□□ -0.63
CSDE1-213ENST00000530784 TM9SF2Q99805 663 aa11.13□□□□□ -0.63
CSDE1-213ENST00000530784 SLAMF8Q9P0V8 285 aa11.13□□□□□ -0.63
CSDE1-213ENST00000530784 CTNND2Q9UQB3 1225 aa11.13□□□□□ -0.63
CSDE1-213ENST00000530784 NASPP49321 788 aaPredicted RBP11.12□□□□□ -0.63
CSDE1-213ENST00000530784 TMC3Q7Z5M5 1100 aa11.12□□□□□ -0.63
CSDE1-213ENST00000530784 TAB3Q8N5C8 712 aaPredicted RBP11.12□□□□□ -0.63
CSDE1-213ENST00000530784 ALPK1Q96QP1 1244 aa11.12□□□□□ -0.63
CSDE1-213ENST00000530784 CRBNQ96SW2 442 aa11.12□□□□□ -0.63
CSDE1-213ENST00000530784 ASCC2Q9H1I8 757 aaPredicted RBP11.12□□□□□ -0.63
CSDE1-213ENST00000530784 C19orf73Q9NVV2 129 aa11.12□□□□□ -0.63
CSDE1-213ENST00000530784 BIN1O00499 593 aa11.11□□□□□ -0.63
CSDE1-213ENST00000530784 EGR3Q06889 387 aa11.11□□□□□ -0.63
CSDE1-213ENST00000530784 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
CSDE1-213ENST00000530784 PCDHA11Q9Y5I1 949 aa11.11□□□□□ -0.63
CSDE1-213ENST00000530784 DNAJC25-GNG10A0A024R161 153 aa11.1□□□□□ -0.63
CSDE1-213ENST00000530784 GUCY2CP25092 1073 aa11.1□□□□□ -0.63
CSDE1-213ENST00000530784 LTKP29376 864 aa11.1□□□□□ -0.63
CSDE1-213ENST00000530784 EIF6P56537 245 aaKnown RBP11.1□□□□□ -0.63
CSDE1-213ENST00000530784 RALGPS1Q5JS13 557 aa11.1□□□□□ -0.63
CSDE1-213ENST00000530784 FLAD1Q8NFF5 587 aa11.1□□□□□ -0.63
CSDE1-213ENST00000530784 DHRS1Q96LJ7 313 aa11.1□□□□□ -0.63
CSDE1-213ENST00000530784 SRRTQ9BXP5 876 aaKnown RBP11.1□□□□□ -0.63
CSDE1-213ENST00000530784 PRDM14Q9GZV8 571 aa11.1□□□□□ -0.63
CSDE1-213ENST00000530784 MKRN2Q9H000 416 aaKnown RBP11.1□□□□□ -0.63
CSDE1-213ENST00000530784 SUCOQ9UBS9 1254 aaKnown RBP11.1□□□□□ -0.63
CSDE1-213ENST00000530784 KIF27Q86VH2 1401 aa11.09□□□□□ -0.63
CSDE1-213ENST00000530784 PAX4O43316 350 aa11.09□□□□□ -0.63
CSDE1-213ENST00000530784 UNC5AQ6ZN44 842 aa11.09□□□□□ -0.63
CSDE1-213ENST00000530784 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
CSDE1-213ENST00000530784 HDAC8Q9BY41 377 aa11.09□□□□□ -0.63
CSDE1-213ENST00000530784 CUL7Q14999 1698 aa11.08□□□□□ -0.64
CSDE1-213ENST00000530784 C9IYK1 514 aa11.08□□□□□ -0.64
CSDE1-213ENST00000530784 GDNFP39905 211 aa11.08□□□□□ -0.64
CSDE1-213ENST00000530784 GIPRP48546 466 aa11.08□□□□□ -0.64
CSDE1-213ENST00000530784 SYTL5Q8TDW5 730 aaPredicted RBP11.08□□□□□ -0.64
CSDE1-213ENST00000530784 ASIC4Q96FT7 647 aa11.08□□□□□ -0.64
CSDE1-213ENST00000530784 SEC16BQ96JE7 1060 aa11.08□□□□□ -0.64
CSDE1-213ENST00000530784 ADAMTS10Q9H324 1103 aa11.08□□□□□ -0.64
CSDE1-213ENST00000530784 TDRD10Q5VZ19 366 aaKnown RBP11.07□□□□□ -0.64
CSDE1-213ENST00000530784 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
CSDE1-213ENST00000530784 MINPP1Q9UNW1 487 aa11.07□□□□□ -0.64
CSDE1-213ENST00000530784 RNF114Q9Y508 228 aa11.07□□□□□ -0.64
CSDE1-213ENST00000530784 KIAA0586Q9BVV6 1533 aa11.07□□□□□ -0.64
CSDE1-213ENST00000530784 CARMIL2Q6F5E8 1435 aa11.07□□□□□ -0.64
CSDE1-213ENST00000530784 PRAMEF1O95521 474 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 PMS1P54277 932 aaKnown RBP11.06□□□□□ -0.64
CSDE1-213ENST00000530784 AUHQ13825 339 aaKnown RBP11.06□□□□□ -0.64
CSDE1-213ENST00000530784 PPFIBP1Q86W92 1011 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 DAGLBQ8NCG7 672 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 CPLX3Q8WVH0 158 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 SHDQ96IW2 340 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 KRTAP4-8Q9BYQ9 185 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 TMEM59LQ9UK28 342 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 FBXL21Q9UKT6 434 aa11.06□□□□□ -0.64
CSDE1-213ENST00000530784 MAPKBP1O60336 1514 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms