RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 TTC22Q5TAA0 569 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 PLEKHH3Q7Z736 793 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 STK11IPQ8N1F8 1099 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 SHCBP1Q8NEM2 672 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 NUDT12Q9BQG2 462 aa18.36■□□□□ 0.53
CCDC90B-215ENST00000529745 TTLL1O95922 423 aa18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 GJB1P08034 283 aa18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 TSPY3P0CV98 308 aa18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 TSPY8P0CW00 308 aa18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 GSPT1P15170 499 aaKnown RBP18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 SPICE1Q8N0Z3 855 aa18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
CCDC90B-215ENST00000529745 F5H6K3 240 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 FLOT1O75955 427 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 HMGCRP04035 888 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 INHAP05111 366 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 CCL5P13501 91 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 ELNP15502 786 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 NT5C2P49902 561 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 MNX1P50219 401 aaPredicted RBP18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 TFAP4Q01664 338 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 CTDSPL2Q05D32 466 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 KLRC3Q07444 240 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 NKX2-3Q8TAU0 364 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 SPATC1LQ9H0A9 340 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 TACC3Q9Y6A5 838 aa18.34■□□□□ 0.53
CCDC90B-215ENST00000529745 FRMPD3Q5JV73 1810 aa18.33■□□□□ 0.53
CCDC90B-215ENST00000529745 SLC15A5A6NIM6 579 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 NDUFB10O96000 172 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 HOXC6P09630 235 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 PTPREP23469 700 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 GJA8P48165 433 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 CCAR1Q8IX12 1150 aaKnown RBP18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 ATG4CQ96DT6 458 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 PAK6Q9NQU5 681 aaPredicted RBP18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 PPP1R9AQ9ULJ8 1098 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 LAMA3Q16787 3333 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 PLXNA1Q9UIW2 1896 aa18.33■□□□□ 0.52
CCDC90B-215ENST00000529745 UNC80Q8N2C7 3258 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 STRNO43815 780 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 RGS2P41220 211 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 MAP2K5Q13163 448 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 GRB14Q14449 540 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 FAM47AQ5JRC9 791 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 FAM83BQ5T0W9 1011 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 CWC27Q6UX04 472 aaKnown RBP18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 APBA2Q99767 749 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 MOV10L1Q9BXT6 1211 aaKnown RBP18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 BIN2Q9UBW5 565 aaPredicted RBP18.32■□□□□ 0.52
CCDC90B-215ENST00000529745 RAD50Q92878 1312 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 TSPY2A6NKD2 308 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 REPS2Q8NFH8 660 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 STAG1Q8WVM7 1258 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 TRIB2Q92519 343 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 SHISA4Q96DD7 197 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 RNF208Q9H0X6 261 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 MROH8Q9H579 483 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 TCP11L1Q9NUJ3 509 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 FBXO28Q9NVF7 368 aa18.31■□□□□ 0.52
CCDC90B-215ENST00000529745 VWA5AO00534 786 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 SLC25A27O95847 323 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 IGHA2P01877 340 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 CYP2B6P20813 491 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 TMEM132BQ14DG7 1078 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 ABRAQ8N0Z2 381 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 GMCL1Q96IK5 515 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 ZNF214Q9UL59 606 aaPredicted RBP18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 IVNS1ABPQ9Y6Y0 642 aa18.3■□□□□ 0.52
CCDC90B-215ENST00000529745 RPTORQ8N122 1335 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 ATP2A1O14983 1001 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 PLA2G6O60733 806 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 SGPL1O95470 568 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 COPB2P35606 906 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 AKNAD1Q5T1N1 836 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 UBE2Q1Q7Z7E8 422 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 RIOX2Q8IUF8 465 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 PRPF38AQ8NAV1 312 aaKnown RBP18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 SLF1Q9BQI6 1058 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 CRISPLD2Q9H0B8 497 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 INCENPQ9NQS7 918 aa18.29■□□□□ 0.52
CCDC90B-215ENST00000529745 FDX1P10109 184 aa18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 ERCC3P19447 782 aa18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 LRRC47Q8N1G4 583 aaKnown RBP18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 U2AF1L4Q8WU68 220 aaKnown RBP18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
CCDC90B-215ENST00000529745 CWC22Q9HCG8 908 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms