RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 FGAP02671 866 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 BSPRYQ5W0U4 402 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 ZBTB38Q8NAP3 1195 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-220ENST00000529526 FANCBQ8NB91 859 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 SUPT20HQ8NEM7 779 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 GPT2Q8TD30 523 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 ZNF526Q8TF50 670 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-220ENST00000529526 TEKT1Q969V4 418 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 PUS3Q9BZE2 481 aaKnown RBP8.98□□□□□ -0.97
CTNND1-220ENST00000529526 GREM2Q9H772 168 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 DNM2P50570 870 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 NDUFA8P51970 172 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 SCRN1Q12765 414 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 PROSER3Q2NL68 480 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 HHATQ5VTY9 493 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 VPS37BQ9H9H4 285 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 MTMR6Q9Y217 621 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 THRAP3Q9Y2W1 955 aaKnown RBP8.98□□□□□ -0.97
CTNND1-220ENST00000529526 KIF21AQ7Z4S6 1674 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 ALAS1P13196 640 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 ALDH1B1P30837 517 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 PAK2Q13177 524 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 EAPPQ56P03 285 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-220ENST00000529526 CEP128Q6ZU80 1094 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 B4GALNT4Q76KP1 1039 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 NLRX1Q86UT6 975 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 CCDC89Q8N998 374 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 KDM3AQ9Y4C1 1321 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 M0R2C6 588 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 GMNNO75496 209 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 BRDTQ58F21 947 aaPredicted RBP8.98□□□□□ -0.97
CTNND1-220ENST00000529526 TBC1D22AQ8WUA7 517 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 GLG1Q92896 1179 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 HINFPQ9BQA5 517 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 NT5C3AQ9H0P0 336 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 SLC39A2Q9NP94 309 aa8.98□□□□□ -0.97
CTNND1-220ENST00000529526 DDX25Q9UHL0 483 aaKnown RBP8.98□□□□□ -0.97
CTNND1-220ENST00000529526 KRT15P19012 456 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 IRX3P78415 501 aaPredicted RBP8.97□□□□□ -0.97
CTNND1-220ENST00000529526 ADAT2Q7Z6V5 191 aaKnown RBP8.97□□□□□ -0.97
CTNND1-220ENST00000529526 KIAA0825Q8IV33 1275 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 MYOCDQ8IZQ8 938 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 ANKRD42Q8N9B4 389 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 PNMA1Q8ND90 353 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 NACA2Q9H009 215 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 PCDHA7Q9UN72 937 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 BTBD18B2RXH4 712 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 K7ENM7 598 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 NOL3O60936 208 aaKnown RBP8.97□□□□□ -0.97
CTNND1-220ENST00000529526 XRCC5P13010 732 aaKnown RBP8.97□□□□□ -0.97
CTNND1-220ENST00000529526 NAA25Q14CX7 972 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 TAOK1Q7L7X3 1001 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 KSR1Q8IVT5 923 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 DEPTORQ8TB45 409 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 SYMPKQ92797 1274 aaKnown RBP8.97□□□□□ -0.97
CTNND1-220ENST00000529526 ST7Q9NRC1 585 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 MED23Q9ULK4 1368 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 NEDD9Q14511 834 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 PTPN21Q16825 1174 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 PPFIBP2Q8ND30 876 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 ARHGEF2Q92974 986 aaKnown RBP8.97□□□□□ -0.97
CTNND1-220ENST00000529526 ANO3Q9BYT9 981 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 RASSF4Q9H2L5 321 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 ATP8A2Q9NTI2 1148 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 KLRF2D3W0D1 207 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 KCNK3O14649 394 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 PHKA1P46020 1223 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 ADCK5Q3MIX3 580 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 AMFRQ9UKV5 643 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 PRAMEF22A3QJZ6 481 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 SCG2P13521 617 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 GBP6Q6ZN66 633 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 OTUD6AQ7L8S5 288 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 EEF2KMTQ96G04 330 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 RSRC1Q96IZ7 334 aaKnown RBP8.97□□□□□ -0.97
CTNND1-220ENST00000529526 FANCLQ9NW38 375 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 SAR1BQ9Y6B6 198 aa8.97□□□□□ -0.97
CTNND1-220ENST00000529526 PBRM1Q86U86 1689 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 MLH3Q9UHC1 1453 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 GNA14O95837 355 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 PDIA3P30101 505 aaKnown RBP8.96□□□□□ -0.97
CTNND1-220ENST00000529526 MAN1A1P33908 653 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 GOLGA8FQ08AF8 430 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 GOLGA8DPQ0D2H9 430 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 PSMD6Q15008 389 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 DENND2CQ68D51 928 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 CCDC84Q86UT8 332 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-220ENST00000529526 TAB3Q8N5C8 712 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-220ENST00000529526 CFAP57Q96MR6 1250 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 PCDHA12Q9UN75 941 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 OR52Z1P0C646 297 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 INPP5BP32019 993 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.97
CTNND1-220ENST00000529526 UNC5CLQ8IV45 518 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 TBC1D31Q96DN5 1066 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 LSG1Q9H089 658 aaKnown RBP8.96□□□□□ -0.97
CTNND1-220ENST00000529526 MLXIPQ9HAP2 919 aa8.96□□□□□ -0.97
CTNND1-220ENST00000529526 TSKSQ9UJT2 592 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms