RNA–Protein interactions for RNA: ENST00000529472.1

CHD7-209, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 788 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-209ENST00000529472 TAF1CQ15572 869 aaPredicted RBP13.36□□□□□ -0.27
CHD7-209ENST00000529472 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 CATIPQ7Z7H3 387 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 DCAF4Q8WV16 495 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 GMCL1Q96IK5 515 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
CHD7-209ENST00000529472 ASCC2Q9H1I8 757 aaPredicted RBP13.36□□□□□ -0.27
CHD7-209ENST00000529472 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
CHD7-209ENST00000529472 FRMPD2Q68DX3 1309 aaPredicted RBP13.36□□□□□ -0.27
CHD7-209ENST00000529472 PARP14Q460N5 1801 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 TRPA1O75762 1119 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 FLOT1O75955 427 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 PDHBP11177 359 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 BMP3P12645 472 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 HOXA7P31268 230 aaPredicted RBP13.35□□□□□ -0.27
CHD7-209ENST00000529472 LIFRP42702 1097 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
CHD7-209ENST00000529472 CRHR2Q13324 411 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 CATSPERGQ6ZRH7 1159 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 SMCR8Q8TEV9 937 aaPredicted RBP13.35□□□□□ -0.27
CHD7-209ENST00000529472 BRF1Q92994 677 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 IL17RAQ96F46 866 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 MYL10Q9BUA6 226 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 BEGAINQ9BUH8 593 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 ZCCHC17Q9NP64 241 aaKnown RBP13.35□□□□□ -0.27
CHD7-209ENST00000529472 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 FBXO28Q9NVF7 368 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 RNF186Q9NXI6 227 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 NAP1L2Q9ULW6 460 aaPredicted RBP13.35□□□□□ -0.27
CHD7-209ENST00000529472 SLC45A1Q9Y2W3 748 aa13.35□□□□□ -0.27
CHD7-209ENST00000529472 KLF18A0A0U1RQI7 1052 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 GOLGA8HP0CJ92 632 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 RXRAP19793 462 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 APOBRQ0VD83 1088 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 ZNF654Q8IZM8 581 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 TMTC2Q8N394 836 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 JMYQ8N9B5 988 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 KIF2CQ99661 725 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 ZFYVE28Q9HCC9 887 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 TSKSQ9UJT2 592 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 SLC12A7Q9Y666 1083 aa13.34□□□□□ -0.27
CHD7-209ENST00000529472 RLFQ13129 1914 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 GOLGA8BA8MQT2 603 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 TMEM232C9JQI7 657 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 CA12O43570 354 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 DDAH1O94760 285 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
CHD7-209ENST00000529472 SNHG28P0DPA3 235 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 SLC16A2P36021 539 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 NEK4P51957 841 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 STAT2P52630 851 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 HERVK_113P62684 666 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 ZNF543Q08ER8 600 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 APOA5Q6Q788 366 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 SYNE3Q6ZMZ3 975 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 P2RX7Q99572 595 aaKnown RBP13.33□□□□□ -0.28
CHD7-209ENST00000529472 SLF1Q9BQI6 1058 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 LARP6Q9BRS8 491 aaKnown RBP13.33□□□□□ -0.28
CHD7-209ENST00000529472 R3HDMLQ9H3Y0 253 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 WBP1LQ9NX94 342 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 BRPF3Q9ULD4 1205 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 CENPFP49454 3210 aa13.33□□□□□ -0.28
CHD7-209ENST00000529472 HTTP42858 3142 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 SPDYE16A6NNV3 312 aaPredicted RBP13.32□□□□□ -0.28
CHD7-209ENST00000529472 TROAPQ12815 778 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 TOB2Q14106 344 aaPredicted RBP13.32□□□□□ -0.28
CHD7-209ENST00000529472 COG2Q14746 738 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 GRM4Q14833 912 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 ASPRV1Q53RT3 343 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 NOL8Q76FK4 1167 aaKnown RBP13.32□□□□□ -0.28
CHD7-209ENST00000529472 KIFC2Q96AC6 838 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 ATG4CQ96DT6 458 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 AGXT2Q9BYV1 514 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 CPVLQ9H3G5 476 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 SAGE1Q9NXZ1 904 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 PPP1R9AQ9ULJ8 1098 aa13.32□□□□□ -0.28
CHD7-209ENST00000529472 A0A0G2JMZ2 1700 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 ZBTB43O43298 467 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 TLR2O60603 784 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 PEX10O60683 326 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 CALM1P0DP23 149 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 CALM2P0DP24 149 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 CALM3P0DP25 149 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 AK2P54819 239 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 GPATCH4Q5T3I0 446 aaKnown RBP13.31□□□□□ -0.28
CHD7-209ENST00000529472 STAG2Q8N3U4 1231 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 FBXL16Q8N461 479 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 ANKRD13CQ8N6S4 541 aa13.31□□□□□ -0.28
CHD7-209ENST00000529472 CTCFLQ8NI51 663 aaPredicted RBP13.31□□□□□ -0.28
CHD7-209ENST00000529472 CHURC1Q8WUH1 139 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms