RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 ADAMTS4O75173 837 aa21.66■■□□□ 1.06
LTBP3-211ENST00000528966 IDH1O75874 414 aaKnown RBP21.66■■□□□ 1.06
LTBP3-211ENST00000528966 TMEM240Q5SV17 173 aa21.66■■□□□ 1.06
LTBP3-211ENST00000528966 CERS3Q8IU89 383 aa21.66■■□□□ 1.06
LTBP3-211ENST00000528966 TRANK1O15050 2925 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 DCDC2CA8MYV0 355 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 GNAI2P04899 355 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 PGK2P07205 417 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 ZNF865P0CJ78 1059 aaPredicted RBP21.65■■□□□ 1.06
LTBP3-211ENST00000528966 HOXD11P31277 338 aaPredicted RBP21.65■■□□□ 1.06
LTBP3-211ENST00000528966 ACLYP53396 1101 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 CCDC85BQ15834 202 aaPredicted RBP21.65■■□□□ 1.06
LTBP3-211ENST00000528966 CCDC129Q6ZRS4 1044 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 MAGEB6Q8N7X4 407 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 TINF2Q9BSI4 451 aa21.65■■□□□ 1.06
LTBP3-211ENST00000528966 FLOT1O75955 427 aa21.64■■□□□ 1.05
LTBP3-211ENST00000528966 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.05
LTBP3-211ENST00000528966 TMEM132BQ14DG7 1078 aa21.64■■□□□ 1.05
LTBP3-211ENST00000528966 MFSD5Q6N075 450 aa21.64■■□□□ 1.05
LTBP3-211ENST00000528966 TSEN34Q9BSV6 310 aaKnown RBP21.64■■□□□ 1.05
LTBP3-211ENST00000528966 STARD7Q9NQZ5 370 aa21.64■■□□□ 1.05
LTBP3-211ENST00000528966 DBNLQ9UJU6 430 aaKnown RBP21.64■■□□□ 1.05
LTBP3-211ENST00000528966 SYNRGQ9UMZ2 1314 aa21.63■■□□□ 1.05
LTBP3-211ENST00000528966 MPHOSPH10O00566 681 aaKnown RBP21.63■■□□□ 1.05
LTBP3-211ENST00000528966 AKR1A1P14550 325 aa21.63■■□□□ 1.05
LTBP3-211ENST00000528966 ZNF792Q3KQV3 632 aa21.63■■□□□ 1.05
LTBP3-211ENST00000528966 ARHGAP45Q92619 1136 aa21.63■■□□□ 1.05
LTBP3-211ENST00000528966 NECAB3Q96P71 396 aaPredicted RBP21.63■■□□□ 1.05
LTBP3-211ENST00000528966 MMP19Q99542 508 aa21.63■■□□□ 1.05
LTBP3-211ENST00000528966 TLR7Q9NYK1 1049 aaKnown RBP21.63■■□□□ 1.05
LTBP3-211ENST00000528966 MYH8P13535 1937 aa21.63■■□□□ 1.05
LTBP3-211ENST00000528966 CSF2RAP15509 400 aa21.62■■□□□ 1.05
LTBP3-211ENST00000528966 PPIGQ13427 754 aaKnown RBP eCLIP21.62■■□□□ 1.05
LTBP3-211ENST00000528966 CCSAPQ6IQ19 270 aaPredicted RBP21.62■■□□□ 1.05
LTBP3-211ENST00000528966 CLEC10AQ8IUN9 316 aa21.62■■□□□ 1.05
LTBP3-211ENST00000528966 SIAH1Q8IUQ4 282 aa21.62■■□□□ 1.05
LTBP3-211ENST00000528966 SPICE1Q8N0Z3 855 aa21.62■■□□□ 1.05
LTBP3-211ENST00000528966 KLHDC9Q8NEP7 349 aa21.62■■□□□ 1.05
LTBP3-211ENST00000528966 NUP133Q8WUM0 1156 aa21.62■■□□□ 1.05
LTBP3-211ENST00000528966 RIOK1Q9BRS2 568 aaKnown RBP21.62■■□□□ 1.05
LTBP3-211ENST00000528966 SLC25A27O95847 323 aa21.61■■□□□ 1.05
LTBP3-211ENST00000528966 IGFBP4P22692 258 aa21.61■■□□□ 1.05
LTBP3-211ENST00000528966 RARSP54136 660 aaKnown RBP21.61■■□□□ 1.05
LTBP3-211ENST00000528966 ANTXR1Q9H6X2 564 aa21.61■■□□□ 1.05
LTBP3-211ENST00000528966 DIS3Q9Y2L1 958 aaKnown RBP21.61■■□□□ 1.05
LTBP3-211ENST00000528966 PIEZO1Q92508 2521 aa21.61■■□□□ 1.05
LTBP3-211ENST00000528966 MOXD2PA6NHM9 499 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 POLR3DP05423 398 aaPredicted RBP21.6■■□□□ 1.05
LTBP3-211ENST00000528966 ACRP10323 421 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 POLA2Q14181 598 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 KCNA10Q16322 511 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 SAMD1Q6SPF0 538 aaPredicted RBP21.6■■□□□ 1.05
LTBP3-211ENST00000528966 ZNF365Q70YC5 407 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 IL27Q8NEV9 243 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 ADAMTS5Q9UNA0 930 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 TNNQ9UQP3 1299 aa21.6■■□□□ 1.05
LTBP3-211ENST00000528966 MYADML2A6NDP7 307 aa21.59■■□□□ 1.05
LTBP3-211ENST00000528966 CDK7P50613 346 aa21.59■■□□□ 1.05
LTBP3-211ENST00000528966 IRX5P78411 483 aaPredicted RBP21.59■■□□□ 1.05
LTBP3-211ENST00000528966 CCDC174Q6PII3 467 aa21.59■■□□□ 1.05
LTBP3-211ENST00000528966 TMEM179Q6ZVK1 233 aa21.59■■□□□ 1.05
LTBP3-211ENST00000528966 RIOX2Q8IUF8 465 aa21.59■■□□□ 1.05
LTBP3-211ENST00000528966 TMX2Q9Y320 296 aa21.59■■□□□ 1.05
LTBP3-211ENST00000528966 BMP1P13497 986 aa21.58■■□□□ 1.05
LTBP3-211ENST00000528966 OS9Q13438 667 aaPredicted RBP21.58■■□□□ 1.05
LTBP3-211ENST00000528966 KCTD2Q14681 263 aa21.58■■□□□ 1.05
LTBP3-211ENST00000528966 C1QTNF1Q9BXJ1 281 aa21.58■■□□□ 1.05
LTBP3-211ENST00000528966 CCDC8Q9H0W5 538 aaPredicted RBP21.58■■□□□ 1.05
LTBP3-211ENST00000528966 VCPKMTQ9H867 229 aa21.58■■□□□ 1.05
LTBP3-211ENST00000528966 CXXC1Q9P0U4 656 aaPredicted RBP21.58■■□□□ 1.05
LTBP3-211ENST00000528966 CNPY2Q9Y2B0 182 aa21.58■■□□□ 1.05
LTBP3-211ENST00000528966 MCM3APO60318 1980 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 MROH7Q68CQ1 1323 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 RAB30Q15771 203 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 PSRC1Q6PGN9 363 aaPredicted RBP21.57■■□□□ 1.04
LTBP3-211ENST00000528966 PPP1R12CQ9BZL4 782 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 NKX2-4Q9H2Z4 354 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 FBXO28Q9NVF7 368 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 MCM9Q9NXL9 1143 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 MSRAQ9UJ68 235 aa21.57■■□□□ 1.04
LTBP3-211ENST00000528966 YBX2Q9Y2T7 364 aaKnown RBP21.57■■□□□ 1.04
LTBP3-211ENST00000528966 PRRC2BQ5JSZ5 2229 aaKnown RBP21.57■■□□□ 1.04
LTBP3-211ENST00000528966 ELP1O95163 1332 aa21.56■■□□□ 1.04
LTBP3-211ENST00000528966 WDR46O15213 610 aaKnown RBP21.56■■□□□ 1.04
LTBP3-211ENST00000528966 CYP2D6P10635 497 aa21.56■■□□□ 1.04
LTBP3-211ENST00000528966 TRIM27P14373 513 aa21.56■■□□□ 1.04
LTBP3-211ENST00000528966 TMEM199Q8N511 208 aa21.56■■□□□ 1.04
LTBP3-211ENST00000528966 SSH3Q8TE77 659 aa21.56■■□□□ 1.04
LTBP3-211ENST00000528966 EAF2Q96CJ1 260 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-211ENST00000528966 GLT1D1Q96MS3 346 aa21.56■■□□□ 1.04
LTBP3-211ENST00000528966 ARHGEF10LQ9HCE6 1279 aa21.56■■□□□ 1.04
LTBP3-211ENST00000528966 ZNF214Q9UL59 606 aaPredicted RBP21.56■■□□□ 1.04
LTBP3-211ENST00000528966 SURF6O75683 361 aaKnown RBP21.55■■□□□ 1.04
LTBP3-211ENST00000528966 SNAI1O95863 264 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-211ENST00000528966 AKR1B1P15121 316 aa21.55■■□□□ 1.04
LTBP3-211ENST00000528966 CST5P28325 142 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-211ENST00000528966 TFF2Q03403 129 aa21.55■■□□□ 1.04
LTBP3-211ENST00000528966 ICA1Q05084 483 aa21.55■■□□□ 1.04
LTBP3-211ENST00000528966 TMED8Q6PL24 325 aaPredicted RBP21.55■■□□□ 1.04
LTBP3-211ENST00000528966 HERVK_113Q902F9 699 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms