RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 MYPNQ86TC9 1320 aa16.87■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L15C9J2P7 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L13C9JLJ4 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L11C9JVI0 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L18D6R9N7 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L22D6RA61 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L17D6RBQ6 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L19D6RCP7 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L20D6RJB6 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 PDHBP11177 359 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 USP17L24Q0WX57 530 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 TROAPQ12815 778 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 GRM1Q13255 1194 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 DGKZQ13574 1117 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 ZYXQ15942 572 aaKnown RBP16.86■□□□□ 0.29
UBXN1-209ENST00000528907 TREML2Q5T2D2 321 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 CATSPERGQ6ZRH7 1159 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 PNMA3Q9UL41 463 aa16.86■□□□□ 0.29
UBXN1-209ENST00000528907 A0A0G2JMZ2 1700 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 PDHXO00330 501 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 DDAH1O94760 285 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 BMP3P12645 472 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 CPA1P15085 419 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 LBX2Q6XYB7 198 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 Q6ZUG5 572 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
UBXN1-209ENST00000528907 SENP2Q9HC62 589 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 SAGE1Q9NXZ1 904 aa16.85■□□□□ 0.29
UBXN1-209ENST00000528907 CALM1P0DP23 149 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 CALM2P0DP24 149 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 CALM3P0DP25 149 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 OSBPP22059 807 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 SLC1A4P43007 532 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 GPATCH4Q5T3I0 446 aaKnown RBP16.84■□□□□ 0.29
UBXN1-209ENST00000528907 BTNL9Q6UXG8 535 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 CATIPQ7Z7H3 387 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 ZNF654Q8IZM8 581 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 GTF3C2Q8WUA4 911 aaPredicted RBP16.84■□□□□ 0.29
UBXN1-209ENST00000528907 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 LRRC2Q9BYS8 371 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
UBXN1-209ENST00000528907 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
UBXN1-209ENST00000528907 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 FEM1BQ9UK73 627 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 NID2Q14112 1375 aa16.84■□□□□ 0.29
UBXN1-209ENST00000528907 CCDC69A6NI79 296 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 CA12O43570 354 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 ZNF543Q08ER8 600 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
UBXN1-209ENST00000528907 COG2Q14746 738 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 GRM4Q14833 912 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 RABEP1Q15276 862 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 ANKRD1Q15327 319 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 ASPRV1Q53RT3 343 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 FAM160B2Q86V87 743 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 SPICE1Q8N0Z3 855 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 ADGRA2Q96PE1 1338 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 PARK7Q99497 189 aaKnown RBP16.83■□□□□ 0.28
UBXN1-209ENST00000528907 ADAMTS5Q9UNA0 930 aa16.83■□□□□ 0.28
UBXN1-209ENST00000528907 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
UBXN1-209ENST00000528907 FDX1P10109 184 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 PPP2R5BQ15173 497 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
UBXN1-209ENST00000528907 FAM83BQ5T0W9 1011 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 APOA5Q6Q788 366 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 BRF1Q92994 677 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 MCOLN1Q9GZU1 580 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 ASCC2Q9H1I8 757 aaPredicted RBP16.82■□□□□ 0.28
UBXN1-209ENST00000528907 HOXC10Q9NYD6 342 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 TSKSQ9UJT2 592 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 SLC12A7Q9Y666 1083 aa16.82■□□□□ 0.28
UBXN1-209ENST00000528907 SMARCA1P28370 1054 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 DSG3P32926 999 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 NEK4P51957 841 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 STAT2P52630 851 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 FGD1P98174 961 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 SYNE3Q6ZMZ3 975 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 NFXL1Q6ZNB6 911 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 PRPF38AQ8NAV1 312 aaKnown RBP16.81■□□□□ 0.28
UBXN1-209ENST00000528907 CHURC1Q8WUH1 139 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
UBXN1-209ENST00000528907 ZFYVE28Q9HCC9 887 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 RNF186Q9NXI6 227 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 BRPF3Q9ULD4 1205 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 PPP1R9AQ9ULJ8 1098 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 PDE4DIPQ5VU43 2346 aa16.81■□□□□ 0.28
UBXN1-209ENST00000528907 TLR2O60603 784 aa16.8■□□□□ 0.28
UBXN1-209ENST00000528907 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
UBXN1-209ENST00000528907 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
UBXN1-209ENST00000528907 IRX3P78415 501 aaPredicted RBP16.8■□□□□ 0.28
UBXN1-209ENST00000528907 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
UBXN1-209ENST00000528907 NUP88Q99567 741 aaPredicted RBP16.8■□□□□ 0.28
UBXN1-209ENST00000528907 P2RX7Q99572 595 aaKnown RBP16.8■□□□□ 0.28
UBXN1-209ENST00000528907 SLF1Q9BQI6 1058 aa16.8■□□□□ 0.28
UBXN1-209ENST00000528907 TANGO6Q9C0B7 1094 aa16.8■□□□□ 0.28
UBXN1-209ENST00000528907 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
UBXN1-209ENST00000528907 KLF18A0A0U1RQI7 1052 aa16.79■□□□□ 0.28
UBXN1-209ENST00000528907 SPDYE16A6NNV3 312 aaPredicted RBP16.79■□□□□ 0.28
UBXN1-209ENST00000528907 TMEM232C9JQI7 657 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms