RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DIAPH3Q9NSV4 1193 aa18.45■□□□□ 0.54
CAPN1-213ENST00000527897 CCDC171Q6TFL3 1326 aa18.45■□□□□ 0.54
CAPN1-213ENST00000527897 A0A0G2JMZ2 1700 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 IGKV6D-41A0A0C4DH26 115 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 TTLL1O95922 423 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 NDUFB10O96000 172 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 PTPREP23469 700 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 MAP2K5Q13163 448 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 RRP12Q5JTH9 1297 aaKnown RBP18.44■□□□□ 0.54
CAPN1-213ENST00000527897 CWC27Q6UX04 472 aaKnown RBP18.44■□□□□ 0.54
CAPN1-213ENST00000527897 NCAPG2Q86XI2 1143 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 MB21D1Q8N884 522 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 NEDD1Q8NHV4 660 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 APBA2Q99767 749 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.54
CAPN1-213ENST00000527897 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
CAPN1-213ENST00000527897 MTMR4Q9NYA4 1195 aa18.44■□□□□ 0.54
CAPN1-213ENST00000527897 SLC15A5A6NIM6 579 aa18.43■□□□□ 0.54
CAPN1-213ENST00000527897 RANBP6O60518 1105 aaKnown RBP18.43■□□□□ 0.54
CAPN1-213ENST00000527897 SGPL1O95470 568 aa18.43■□□□□ 0.54
CAPN1-213ENST00000527897 FGAP02671 866 aa18.43■□□□□ 0.54
CAPN1-213ENST00000527897 HSPD1P10809 573 aaKnown RBP18.43■□□□□ 0.54
CAPN1-213ENST00000527897 XRCC5P13010 732 aaKnown RBP18.43■□□□□ 0.54
CAPN1-213ENST00000527897 PRKAR2AP13861 404 aaKnown RBP18.43■□□□□ 0.54
CAPN1-213ENST00000527897 ERCC3P19447 782 aa18.43■□□□□ 0.54
CAPN1-213ENST00000527897 PDE4AP27815 886 aa18.43■□□□□ 0.54
CAPN1-213ENST00000527897 HAND2P61296 217 aa18.43■□□□□ 0.54
CAPN1-213ENST00000527897 USP6NLQ92738 828 aa18.43■□□□□ 0.54
CAPN1-213ENST00000527897 SLC4A3P48751 1232 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 MFAP1P55081 439 aaKnown RBP18.42■□□□□ 0.54
CAPN1-213ENST00000527897 TMEM132BQ14DG7 1078 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 ALX1Q15699 326 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 PRPF38BQ5VTL8 546 aaKnown RBP18.42■□□□□ 0.54
CAPN1-213ENST00000527897 DPP9Q86TI2 863 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 TICAM2Q86XR7 235 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 TRMT44Q8IYL2 757 aaKnown RBP18.42■□□□□ 0.54
CAPN1-213ENST00000527897 PAK6Q9NQU5 681 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-213ENST00000527897 PPP1R9AQ9ULJ8 1098 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 STX8Q9UNK0 236 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.42■□□□□ 0.54
CAPN1-213ENST00000527897 RPTORQ8N122 1335 aa18.42■□□□□ 0.54
CAPN1-213ENST00000527897 NMT2O60551 498 aa18.41■□□□□ 0.54
CAPN1-213ENST00000527897 FARP2O94887 1054 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-213ENST00000527897 GRB14Q14449 540 aa18.41■□□□□ 0.54
CAPN1-213ENST00000527897 SLF1Q9BQI6 1058 aa18.41■□□□□ 0.54
CAPN1-213ENST00000527897 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
CAPN1-213ENST00000527897 MTMR7Q9Y216 660 aa18.41■□□□□ 0.54
CAPN1-213ENST00000527897 CTDP1Q9Y5B0 961 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-213ENST00000527897 TACC3Q9Y6A5 838 aa18.41■□□□□ 0.54
CAPN1-213ENST00000527897 PLIN4Q96Q06 1357 aa18.41■□□□□ 0.54
CAPN1-213ENST00000527897 HIP1O00291 1037 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 VWA5AO00534 786 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 ADORA2AP29274 412 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-213ENST00000527897 SLFN13Q68D06 897 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 SHCBP1Q8NEM2 672 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 NPLOC4Q8TAT6 608 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 MKL1Q969V6 931 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 KIFC2Q96AC6 838 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 MROH8Q9H579 483 aa18.4■□□□□ 0.54
CAPN1-213ENST00000527897 IKQ13123 557 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-213ENST00000527897 MFSD14CQ5VZR4 134 aa18.39■□□□□ 0.53
CAPN1-213ENST00000527897 DPF3Q92784 378 aa18.39■□□□□ 0.53
CAPN1-213ENST00000527897 FLRT1Q9NZU1 646 aa18.39■□□□□ 0.53
CAPN1-213ENST00000527897 STRNO43815 780 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 SLC25A27O95847 323 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 BMP3P12645 472 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 STAT3P40763 770 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 TTC22Q5TAA0 569 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 CPXCR1Q8N123 301 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 PRPF38AQ8NAV1 312 aaKnown RBP18.38■□□□□ 0.53
CAPN1-213ENST00000527897 GMCL1P1Q8NEA9 526 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 ADAMTS5Q9UNA0 930 aa18.38■□□□□ 0.53
CAPN1-213ENST00000527897 ZNFX1Q9P2E3 1918 aaKnown RBP18.37■□□□□ 0.53
CAPN1-213ENST00000527897 ORC4O43929 436 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 ZBED4O75132 1171 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 FCER1AP12319 257 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 GSPT1P15170 499 aaKnown RBP18.37■□□□□ 0.53
CAPN1-213ENST00000527897 MCCP23508 829 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 CNGA1P29973 690 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 CCND3P30281 292 aaPredicted RBP18.37■□□□□ 0.53
CAPN1-213ENST00000527897 CYP2C19P33261 490 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 SLC1A4P43007 532 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 PPP4R3BQ5MIZ7 849 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 MAP3K21Q5TCX8 1036 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 MMP19Q99542 508 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 IL17RBQ9NRM6 502 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 FEM1BQ9UK73 627 aa18.37■□□□□ 0.53
CAPN1-213ENST00000527897 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 COBLO75128 1261 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 ZMYM6O95789 1325 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 SNRNP48Q6IEG0 339 aaKnown RBP18.36■□□□□ 0.53
CAPN1-213ENST00000527897 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 RIOX2Q8IUF8 465 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 REPS2Q8NFH8 660 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 CRISPLD2Q9H0B8 497 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 SLC5A4Q9NY91 659 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 ZNF214Q9UL59 606 aaPredicted RBP18.36■□□□□ 0.53
CAPN1-213ENST00000527897 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
CAPN1-213ENST00000527897 ZNF236Q9UL36 1845 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms