RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 RNF208Q9H0X6 261 aa31.23■■■□□ 2.59
TSPAN4-217ENST00000527644 MYH4Q9Y623 1939 aa31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 HMGCRP04035 888 aa31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 RGS2P41220 211 aa31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 SAMD1Q6SPF0 538 aaPredicted RBP31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 GMCL1P1Q8NEA9 526 aa31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 SHCBP1Q8NEM2 672 aa31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 MOV10L1Q9BXT6 1211 aaKnown RBP31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 FBXO28Q9NVF7 368 aa31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 PPP1R9AQ9ULJ8 1098 aa31.22■■■□□ 2.59
TSPAN4-217ENST00000527644 BRCA2P51587 3418 aa31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 A0A0G2JMZ2 1700 aa31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 SLC15A5A6NIM6 579 aa31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 GJB1P08034 283 aa31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 TRMT44Q8IYL2 757 aaKnown RBP31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 NKX2-3Q8TAU0 364 aa31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 NUP88Q99567 741 aaPredicted RBP31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 TOMM22Q9NS69 142 aa31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 IVNS1ABPQ9Y6Y0 642 aa31.21■■■□□ 2.59
TSPAN4-217ENST00000527644 PARP14Q460N5 1801 aa31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 PCP11498 1178 aaKnown RBP31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 PTPREP23469 700 aa31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 HAND2P61296 217 aa31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 LRRC47Q8N1G4 583 aaKnown RBP31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 DSCC1Q9BVC3 393 aa31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 UNC93B1Q9H1C4 597 aa31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 IL17RBQ9NRM6 502 aa31.2■■■□□ 2.59
TSPAN4-217ENST00000527644 MAP2K5Q13163 448 aa31.19■■■□□ 2.58
TSPAN4-217ENST00000527644 PLS1Q14651 629 aa31.19■■■□□ 2.58
TSPAN4-217ENST00000527644 AKNAD1Q5T1N1 836 aa31.19■■■□□ 2.58
TSPAN4-217ENST00000527644 SLF1Q9BQI6 1058 aa31.19■■■□□ 2.58
TSPAN4-217ENST00000527644 STX8Q9UNK0 236 aa31.19■■■□□ 2.58
TSPAN4-217ENST00000527644 VWA5AO00534 786 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 ZNF213O14771 459 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 TMEM132BQ14DG7 1078 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 RRP12Q5JTH9 1297 aaKnown RBP31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 SLFN13Q68D06 897 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 MFSD6Q6ZSS7 791 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 STAG1Q8WVM7 1258 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 TRIB2Q92519 343 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 APBA2Q99767 749 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 RNF41Q9H4P4 317 aaPredicted RBP31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 MROH8Q9H579 483 aa31.18■■■□□ 2.58
TSPAN4-217ENST00000527644 STRNO43815 780 aa31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 ERCC3P19447 782 aa31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 GJA8P48165 433 aa31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 GRB14Q14449 540 aa31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 CENPQQ7L2Z9 268 aaPredicted RBP31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 PRPF38AQ8NAV1 312 aaKnown RBP31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 NBPF3Q9H094 633 aa31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 TNRC18O15417 2968 aaPredicted RBP31.17■■■□□ 2.58
TSPAN4-217ENST00000527644 NMT2O60551 498 aa31.16■■■□□ 2.58
TSPAN4-217ENST00000527644 SLC25A27O95847 323 aa31.16■■■□□ 2.58
TSPAN4-217ENST00000527644 NOVP48745 357 aa31.16■■■□□ 2.58
TSPAN4-217ENST00000527644 RUFY2Q8WXA3 655 aa31.16■■■□□ 2.58
TSPAN4-217ENST00000527644 CTNNA3Q9UI47 895 aa31.16■■■□□ 2.58
TSPAN4-217ENST00000527644 FEM1BQ9UK73 627 aa31.16■■■□□ 2.58
TSPAN4-217ENST00000527644 RAD50Q92878 1312 aa31.16■■■□□ 2.58
TSPAN4-217ENST00000527644 BMP3P12645 472 aa31.15■■■□□ 2.58
TSPAN4-217ENST00000527644 ZKSCAN1P17029 563 aaPredicted RBP31.15■■■□□ 2.58
TSPAN4-217ENST00000527644 NCAPG2Q86XI2 1143 aa31.15■■■□□ 2.58
TSPAN4-217ENST00000527644 TCP11L1Q9NUJ3 509 aa31.15■■■□□ 2.58
TSPAN4-217ENST00000527644 HOXC6P09630 235 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 CAPN2P17655 700 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 CHMLP26374 656 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 TBC1D10CQ8IV04 446 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 REPS2Q8NFH8 660 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 GMCL1Q96IK5 515 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 IL25Q9H293 177 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 PAK6Q9NQU5 681 aaPredicted RBP31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 RPTORQ8N122 1335 aa31.14■■■□□ 2.58
TSPAN4-217ENST00000527644 SGPL1O95470 568 aa31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 STAT3P40763 770 aa31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 NT5C2P49902 561 aa31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 TRIM32Q13049 653 aa31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 RIOX2Q8IUF8 465 aa31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 U2AF1L4Q8WU68 220 aaKnown RBP31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 SHISA4Q96DD7 197 aa31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 ZNF214Q9UL59 606 aaPredicted RBP31.13■■■□□ 2.57
TSPAN4-217ENST00000527644 PDE4DIPQ5VU43 2346 aa31.12■■■□□ 2.57
TSPAN4-217ENST00000527644 COPB2P35606 906 aa31.12■■■□□ 2.57
TSPAN4-217ENST00000527644 CCL14Q16627 93 aa31.12■■■□□ 2.57
TSPAN4-217ENST00000527644 IMMTQ16891 758 aaKnown RBP31.12■■■□□ 2.57
TSPAN4-217ENST00000527644 ABRAQ8N0Z2 381 aa31.12■■■□□ 2.57
TSPAN4-217ENST00000527644 XRN2Q9H0D6 950 aaKnown RBP eCLIP31.12■■■□□ 2.572e-6■■■■□ 20.2
TSPAN4-217ENST00000527644 HMX1Q9NP08 348 aaPredicted RBP31.12■■■□□ 2.57
TSPAN4-217ENST00000527644 COL11A1P12107 1806 aaPredicted RBP31.11■■■□□ 2.57
TSPAN4-217ENST00000527644 SLC1A4P43007 532 aa31.11■■■□□ 2.57
TSPAN4-217ENST00000527644 MAP3K21Q5TCX8 1036 aa31.11■■■□□ 2.57
TSPAN4-217ENST00000527644 ESR2Q92731 530 aa31.11■■■□□ 2.57
TSPAN4-217ENST00000527644 KIFC2Q96AC6 838 aa31.11■■■□□ 2.57
TSPAN4-217ENST00000527644 DEFB118Q96PH6 123 aa31.11■■■□□ 2.57
TSPAN4-217ENST00000527644 ZBED4O75132 1171 aa31.1■■■□□ 2.57
TSPAN4-217ENST00000527644 MCCP23508 829 aa31.1■■■□□ 2.57
TSPAN4-217ENST00000527644 ADORA2AP29274 412 aa31.1■■■□□ 2.57
TSPAN4-217ENST00000527644 DPP9Q86TI2 863 aa31.1■■■□□ 2.57
TSPAN4-217ENST00000527644 TMEM232C9JQI7 657 aa31.09■■■□□ 2.57
TSPAN4-217ENST00000527644 TOP1P11387 765 aaKnown RBP31.09■■■□□ 2.57
TSPAN4-217ENST00000527644 FCER1AP12319 257 aa31.09■■■□□ 2.57
TSPAN4-217ENST00000527644 PRKAR2AP13861 404 aaKnown RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms