RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 NBPF3Q9H094 633 aa15.99■□□□□ 0.15
CAPN1-207ENST00000527189 EPB41L4AQ9HCS5 686 aaPredicted RBP15.99■□□□□ 0.15
CAPN1-207ENST00000527189 SLC5A4Q9NY91 659 aa15.99■□□□□ 0.15
CAPN1-207ENST00000527189 EVI5O60447 810 aa15.98■□□□□ 0.15
CAPN1-207ENST00000527189 SLC3A2P08195 630 aaKnown RBP15.98■□□□□ 0.15
CAPN1-207ENST00000527189 ERCC3P19447 782 aa15.98■□□□□ 0.15
CAPN1-207ENST00000527189 DPP9Q86TI2 863 aa15.98■□□□□ 0.15
CAPN1-207ENST00000527189 MKL1Q969V6 931 aa15.98■□□□□ 0.15
CAPN1-207ENST00000527189 ATG4CQ96DT6 458 aa15.98■□□□□ 0.15
CAPN1-207ENST00000527189 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
CAPN1-207ENST00000527189 RLFQ13129 1914 aa15.98■□□□□ 0.15
CAPN1-207ENST00000527189 EYSQ5T1H1 3165 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 MSCO60682 206 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 IGHA2P01877 340 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-207ENST00000527189 PDE1AP54750 535 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 PDE4BQ07343 736 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 OLFML2BQ68BL8 750 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 LHX8Q68G74 356 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 YTHDC1Q96MU7 727 aaKnown RBP15.97■□□□□ 0.15
CAPN1-207ENST00000527189 SEC62Q99442 399 aaKnown RBP15.97■□□□□ 0.15
CAPN1-207ENST00000527189 NAPBQ9H115 298 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 RWDD1Q9H446 243 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-207ENST00000527189 PPP1R9AQ9ULJ8 1098 aa15.97■□□□□ 0.15
CAPN1-207ENST00000527189 IGKV6D-41A0A0C4DH26 115 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 F5H6K3 240 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 ADORA2AP29274 412 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 COPB2P35606 906 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 KLRC3Q07444 240 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 PLS1Q14651 629 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 TMEM132BQ14DG7 1078 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 NPLOC4Q8TAT6 608 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 FLRT1Q9NZU1 646 aa15.96■□□□□ 0.15
CAPN1-207ENST00000527189 VWA5AO00534 786 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 FCER1AP12319 257 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 CCND3P30281 292 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-207ENST00000527189 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 NCAPG2Q86XI2 1143 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 RIOX2Q8IUF8 465 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 STK11IPQ8N1F8 1099 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 NEDD1Q8NHV4 660 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 DIS3LQ8TF46 1054 aaKnown RBP15.95■□□□□ 0.14
CAPN1-207ENST00000527189 C11orf49Q9H6J7 331 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 HELLSQ9NRZ9 838 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 MTMR4Q9NYA4 1195 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 CLIP2Q9UDT6 1046 aa15.95■□□□□ 0.14
CAPN1-207ENST00000527189 GREB1LQ9C091 1923 aaPredicted RBP15.95■□□□□ 0.14
CAPN1-207ENST00000527189 A0A0G2JMZ2 1700 aa15.94■□□□□ 0.14
CAPN1-207ENST00000527189 TTLL1O95922 423 aa15.94■□□□□ 0.14
CAPN1-207ENST00000527189 STAT3P40763 770 aa15.94■□□□□ 0.14
CAPN1-207ENST00000527189 PPARAQ07869 468 aa15.94■□□□□ 0.14
CAPN1-207ENST00000527189 FAM83BQ5T0W9 1011 aa15.94■□□□□ 0.14
CAPN1-207ENST00000527189 PRPF38AQ8NAV1 312 aaKnown RBP15.94■□□□□ 0.14
CAPN1-207ENST00000527189 FBXO28Q9NVF7 368 aa15.94■□□□□ 0.14
CAPN1-207ENST00000527189 LAMA2P24043 3122 aaKnown RBP15.94■□□□□ 0.14
CAPN1-207ENST00000527189 PLIN4Q96Q06 1357 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 SOX1O00570 391 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-207ENST00000527189 RAD21O60216 631 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 COBLO75128 1261 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 PRDM1O75626 825 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 NDUFB10O96000 172 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 COL6A1P12109 1028 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 ALX1Q15699 326 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 GMCL1P1Q8NEA9 526 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 REPS2Q8NFH8 660 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 CEP95Q96GE4 821 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 SLF1Q9BQI6 1058 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 DDX20Q9UHI6 824 aaKnown RBP15.93■□□□□ 0.14
CAPN1-207ENST00000527189 ZNF214Q9UL59 606 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-207ENST00000527189 DIS3Q9Y2L1 958 aaKnown RBP15.93■□□□□ 0.14
CAPN1-207ENST00000527189 ZNF236Q9UL36 1845 aa15.93■□□□□ 0.14
CAPN1-207ENST00000527189 ATP2A1O14983 1001 aa15.92■□□□□ 0.14
CAPN1-207ENST00000527189 CYP2C19P33261 490 aa15.92■□□□□ 0.14
CAPN1-207ENST00000527189 TFAP4Q01664 338 aa15.92■□□□□ 0.14
CAPN1-207ENST00000527189 MCMDC2Q4G0Z9 681 aa15.92■□□□□ 0.14
CAPN1-207ENST00000527189 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
CAPN1-207ENST00000527189 NRBP1Q9UHY1 535 aa15.92■□□□□ 0.14
CAPN1-207ENST00000527189 ANAPC4Q9UJX5 808 aa15.92■□□□□ 0.14
CAPN1-207ENST00000527189 FEM1BQ9UK73 627 aa15.92■□□□□ 0.14
CAPN1-207ENST00000527189 A0A1W2PPC1 479 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 FDX1P10109 184 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 CYBAP13498 195 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 CNGA1P29973 690 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 KCTD2Q14681 263 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 MAML3Q96JK9 1138 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 MMP19Q99542 508 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 TEX13BQ9BXU2 312 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 LNPKQ9C0E8 428 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 OSBPL3Q9H4L5 887 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 PARP14Q460N5 1801 aa15.91■□□□□ 0.14
CAPN1-207ENST00000527189 FOXP2O15409 715 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 SEPT4O43236 478 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 ZBED4O75132 1171 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 FGRP09769 529 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 CCDC129Q6ZRS4 1044 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 CHD1LQ86WJ1 897 aa15.9■□□□□ 0.14
CAPN1-207ENST00000527189 ARRDC4Q8NCT1 418 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms