RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 KIAA1683Q9H0B3 1180 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 TXNRD2Q9NNW7 524 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 CABP5Q9NP86 173 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 INCENPQ9NQS7 918 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 RBPJLQ9UBG7 517 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 LIMCH1Q9UPQ0 1083 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 BRCA2P51587 3418 aa14.88□□□□□ -0.03
SSSCA1-203ENST00000526877 KDM4AO75164 1064 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 HERVK_113P62684 666 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 IRX3P78415 501 aaPredicted RBP14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 SEPT2Q15019 361 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 SART3Q15020 963 aaKnown RBP14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 CHST3Q7LGC8 479 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 SIAH1Q8IUQ4 282 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 TMEM87BQ96K49 555 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 ZSCAN31Q96LW9 406 aaPredicted RBP14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 TCEANC2Q96MN5 208 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 ZSWIM5Q9P217 1185 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 GJD2Q9UKL4 321 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 TACC3Q9Y6A5 838 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
SSSCA1-203ENST00000526877 A0A1W2PRG0 241 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 ERICH2A1L162 156 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 ADCY3O60266 1144 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 RANBP6O60518 1105 aaKnown RBP14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 HSP90AA1P07900 732 aaKnown RBP14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 ZYXQ15942 572 aaKnown RBP14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 Q3C1V9 767 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 C16orf86Q6ZW13 317 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 NOL8Q76FK4 1167 aaKnown RBP14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 CYB5R4Q7L1T6 521 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 FBXL16Q8N461 479 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 SLAIN1Q8ND83 568 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 PXYLP1Q8TE99 480 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 MTA3Q9BTC8 594 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 SWAP70Q9UH65 585 aa14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 MKI67P46013 3256 aaKnown RBP14.86□□□□□ -0.03
SSSCA1-203ENST00000526877 IFIT3O14879 490 aaKnown RBP14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 PRDM1O75626 825 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 ELNP15502 786 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 CDK8P49336 464 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 USP14P54578 494 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 ANTXR2P58335 489 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 COL9A3Q14050 684 aaPredicted RBP14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 TOB2Q14106 344 aaPredicted RBP14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 CATSPERGQ6ZRH7 1159 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 IQCA1Q86XH1 822 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 BRF1Q92994 677 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 COA7Q96BR5 231 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 TMX3Q96JJ7 454 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 UBAC1Q9BSL1 405 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 LRRC2Q9BYS8 371 aa14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 SH2B1Q9NRF2 756 aaPredicted RBP14.85□□□□□ -0.03
SSSCA1-203ENST00000526877 TSPY2A6NKD2 308 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L15C9J2P7 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L13C9JLJ4 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L11C9JVI0 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L18D6R9N7 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L22D6RA61 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L17D6RBQ6 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L19D6RCP7 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L20D6RJB6 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 CCL5P13501 91 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 AKR1B1P15121 316 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 VCAM1P19320 739 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 USP17L24Q0WX57 530 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 CCDC178Q5BJE1 867 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 TMEM67Q5HYA8 995 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 TMEM179Q6ZVK1 233 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 TMTC2Q8N394 836 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 GPRC5AQ8NFJ5 357 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 SHISA4Q96DD7 197 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 FEZ1Q99689 392 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 AGXT2Q9BYV1 514 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 RLFQ13129 1914 aa14.84□□□□□ -0.03
SSSCA1-203ENST00000526877 SH2B2O14492 632 aaPredicted RBP14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 CNMDO75829 334 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 GJB1P08034 283 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 TSPY3P0CV98 308 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 TSPY8P0CW00 308 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 KIAA1755Q5JYT7 1200 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 IGDCC4Q8TDY8 1250 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 CHMP4CQ96CF2 233 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 CCDC17Q96LX7 622 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 LARP6Q9BRS8 491 aaKnown RBP14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 UNC93B1Q9H1C4 597 aa14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 BIN2Q9UBW5 565 aaPredicted RBP14.83□□□□□ -0.04
SSSCA1-203ENST00000526877 MPHOSPH10O00566 681 aaKnown RBP14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 INHAP05111 366 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 RASA1P20936 1047 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 LIFRP42702 1097 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 GJA8P48165 433 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 ERVK-9P63128 1117 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 ERVK-24P63145 666 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 UBXN2AP68543 259 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 TFAP4Q01664 338 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms