RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 TACC3Q9Y6A5 838 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 IVNS1ABPQ9Y6Y0 642 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 MCM3APO60318 1980 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 PFASO15067 1338 aa14.41□□□□□ -0.1
SSBP3-210ENST00000525990 COBLO75128 1261 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 IGHDP01880 384 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 GNAT2P19087 354 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 FAM47AQ5JRC9 791 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 B4GALNT3Q6L9W6 998 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 NCAPG2Q86XI2 1143 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 CHMP4CQ96CF2 233 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 CEP95Q96GE4 821 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 STAP2Q9UGK3 403 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 LAMA4Q16363 1823 aa14.4□□□□□ -0.1
SSBP3-210ENST00000525990 NDUFB10O96000 172 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 IGHA2P01877 340 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 HOXC6P09630 235 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 CTDSPL2Q05D32 466 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 TRMT44Q8IYL2 757 aaKnown RBP14.39□□□□□ -0.11
SSBP3-210ENST00000525990 LRRC47Q8N1G4 583 aaKnown RBP14.39□□□□□ -0.11
SSBP3-210ENST00000525990 REPS2Q8NFH8 660 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 FAM227BQ96M60 508 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 GOPCQ9HD26 462 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
SSBP3-210ENST00000525990 CLIP2Q9UDT6 1046 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 ADAMTS5Q9UNA0 930 aa14.39□□□□□ -0.11
SSBP3-210ENST00000525990 A0A0D9SFI3 127 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 F5H6K3 240 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 VWA5AO00534 786 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 EVI5O60447 810 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 FXR1P51114 621 aaKnown RBP eCLIP14.38□□□□□ -0.11
SSBP3-210ENST00000525990 KLRC3Q07444 240 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 PPARAQ07869 468 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 ANO1Q5XXA6 986 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 RASGRP2Q7LDG7 609 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 DPP9Q86TI2 863 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 C7orf61Q8IZ16 206 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 MB21D1Q8N884 522 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 ANKLE1Q8NAG6 615 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 SHCBP1Q8NEM2 672 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 NAPBQ9H115 298 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 C11orf49Q9H6J7 331 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 NYAP2Q9P242 653 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 ZNF214Q9UL59 606 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-210ENST00000525990 PPP1R9AQ9ULJ8 1098 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 TRIOBPQ9H2D6 2365 aa14.38□□□□□ -0.11
SSBP3-210ENST00000525990 LCTP09848 1927 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 PLIN4Q96Q06 1357 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 PGK2P07205 417 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 CYBAP13498 195 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 CNGA1P29973 690 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
SSBP3-210ENST00000525990 PRAMEF19Q5SWL8 479 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 SMC5Q8IY18 1101 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 ZNF444Q8N0Y2 327 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-210ENST00000525990 NBPF3Q9H094 633 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 MTMR4Q9NYA4 1195 aa14.37□□□□□ -0.11
SSBP3-210ENST00000525990 ZBTB47Q9UFB7 747 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-210ENST00000525990 NMT2O60551 498 aa14.36□□□□□ -0.11
SSBP3-210ENST00000525990 SYN1P17600 705 aa14.36□□□□□ -0.11
SSBP3-210ENST00000525990 ZNF589Q86UQ0 364 aaPredicted RBP14.36□□□□□ -0.11
SSBP3-210ENST00000525990 EVI5LQ96CN4 794 aa14.36□□□□□ -0.11
SSBP3-210ENST00000525990 NACAP1Q9BZK3 213 aa14.36□□□□□ -0.11
SSBP3-210ENST00000525990 PRO3102Q9H379 93 aa14.36□□□□□ -0.11
SSBP3-210ENST00000525990 MROH8Q9H579 483 aa14.36□□□□□ -0.11
SSBP3-210ENST00000525990 ZMYND8Q9ULU4 1186 aaPredicted RBP14.36□□□□□ -0.11
SSBP3-210ENST00000525990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.36□□□□□ -0.113e-6■■■□□ 18.4
SSBP3-210ENST00000525990 RIPK3Q9Y572 518 aa14.36□□□□□ -0.11
SSBP3-210ENST00000525990 TSPY3P0CV98 308 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 TSPY8P0CW00 308 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 COL6A1P12109 1028 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 TFAP4Q01664 338 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 NMIQ13287 307 aaPredicted RBP14.35□□□□□ -0.11
SSBP3-210ENST00000525990 RIOX2Q8IUF8 465 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 NEDD1Q8NHV4 660 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 MAML3Q96JK9 1138 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 MMP19Q99542 508 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 SLF1Q9BQI6 1058 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 DDX20Q9UHI6 824 aaKnown RBP14.35□□□□□ -0.11
SSBP3-210ENST00000525990 NR2E3Q9Y5X4 410 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
SSBP3-210ENST00000525990 STRNO43815 780 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 FCER1AP12319 257 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 STAT3P40763 770 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 SLC4A3P48751 1232 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 LRRC26Q2I0M4 334 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 OLFML2BQ68BL8 750 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 CPXCR1Q8N123 301 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 MKL1Q969V6 931 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 KIFC2Q96AC6 838 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 IL17RBQ9NRM6 502 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 LRRC37A2A6NM11 1700 aa14.34□□□□□ -0.11
SSBP3-210ENST00000525990 TRIM6-TRIM34B2RNG4 842 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 SLC25A27O95847 323 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 TTLL1O95922 423 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 TAL1P17542 331 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-210ENST00000525990 CAPN2P17655 700 aa14.33□□□□□ -0.12
SSBP3-210ENST00000525990 IRX6P78412 446 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms