RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 DSG3P32926 999 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 LIFRP42702 1097 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 LBX1P52954 281 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 ANAPC15P60006 121 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 FAM110CQ1W6H9 321 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 IFIT1BQ5T764 474 aaKnown RBP14.52□□□□□ -0.09
CCS-202ENST00000525435 COL13A1Q5TAT6 717 aaPredicted RBP14.52□□□□□ -0.09
CCS-202ENST00000525435 LRRC47Q8N1G4 583 aaKnown RBP14.52□□□□□ -0.09
CCS-202ENST00000525435 PRPF38AQ8NAV1 312 aaKnown RBP14.52□□□□□ -0.09
CCS-202ENST00000525435 ZKSCAN3Q9BRR0 538 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 KAT14Q9H8E8 782 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 MORF4L1Q9UBU8 362 aa14.52□□□□□ -0.09
CCS-202ENST00000525435 MYH8P13535 1937 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 PRC1O43663 620 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 RAD21O60216 631 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 GNRH1P01148 92 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 SNHG28P0DPA3 235 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 ANTXR2P58335 489 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 EXOSC10Q01780 885 aaKnown RBP14.51□□□□□ -0.09
CCS-202ENST00000525435 C8orf34Q49A92 452 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 TMEM67Q5HYA8 995 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 GPATCH4Q5T3I0 446 aaKnown RBP14.51□□□□□ -0.09
CCS-202ENST00000525435 FAM160B2Q86V87 743 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 FBXL16Q8N461 479 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 PNMA1Q8ND90 353 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 GPRC5AQ8NFJ5 357 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 ZNF296Q8WUU4 475 aaPredicted RBP14.51□□□□□ -0.09
CCS-202ENST00000525435 IL17RAQ96F46 866 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 ERO1AQ96HE7 468 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 TM6SF1Q9BZW5 370 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 RBPJLQ9UBG7 517 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 CPA4Q9UI42 421 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 TSKSQ9UJT2 592 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 PPP1R9AQ9ULJ8 1098 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 SNX14Q9Y5W7 946 aa14.51□□□□□ -0.09
CCS-202ENST00000525435 LAMA4Q16363 1823 aa14.5□□□□□ -0.09
CCS-202ENST00000525435 SPDYE16A6NNV3 312 aaPredicted RBP14.5□□□□□ -0.09
CCS-202ENST00000525435 KIF22Q14807 665 aa14.5□□□□□ -0.09
CCS-202ENST00000525435 WTAPQ15007 396 aa14.5□□□□□ -0.09
CCS-202ENST00000525435 BTNL9Q6UXG8 535 aa14.5□□□□□ -0.09
CCS-202ENST00000525435 MAP3K14Q99558 947 aa14.5□□□□□ -0.09
CCS-202ENST00000525435 SLF1Q9BQI6 1058 aa14.5□□□□□ -0.09
CCS-202ENST00000525435 PTPRFP10586 1907 aa14.5□□□□□ -0.09
CCS-202ENST00000525435 PDHBP11177 359 aa14.49□□□□□ -0.09
CCS-202ENST00000525435 STAT2P52630 851 aa14.49□□□□□ -0.09
CCS-202ENST00000525435 CCNA1P78396 465 aa14.49□□□□□ -0.09
CCS-202ENST00000525435 LACTBP83111 547 aaPredicted RBP14.49□□□□□ -0.09
CCS-202ENST00000525435 ADCK5Q3MIX3 580 aa14.49□□□□□ -0.09
CCS-202ENST00000525435 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
CCS-202ENST00000525435 JAKMIP1Q96N16 626 aaKnown RBP14.49□□□□□ -0.09
CCS-202ENST00000525435 ZSWIM6Q9HCJ5 1215 aa14.49□□□□□ -0.09
CCS-202ENST00000525435 LOC285556D6RIA3 1793 aa14.49□□□□□ -0.09
CCS-202ENST00000525435 TMEM232C9JQI7 657 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 VWA5AO00534 786 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 ZNF543Q08ER8 600 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 ASPRV1Q53RT3 343 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 BLOC1S2Q6QNY1 142 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 CHST3Q7LGC8 479 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 CATIPQ7Z7H3 387 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 SGMS1Q86VZ5 419 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 NUP88Q99567 741 aaPredicted RBP14.48□□□□□ -0.09
CCS-202ENST00000525435 LY9Q9HBG7 655 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 PNMA2Q9UL42 364 aa14.48□□□□□ -0.09
CCS-202ENST00000525435 SH2B2O14492 632 aaPredicted RBP14.47□□□□□ -0.09
CCS-202ENST00000525435 ATP2A1O14983 1001 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 ZBED4O75132 1171 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 SEC24BO95487 1268 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 PARP1P09874 1014 aaKnown RBP14.47□□□□□ -0.09
CCS-202ENST00000525435 CALM1P0DP23 149 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 CALM2P0DP24 149 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 CALM3P0DP25 149 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 HOXD10P28358 340 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 OAZ1P54368 228 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 ERVK-9P63128 1117 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 ERVK-24P63145 666 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 TROAPQ12815 778 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 PKN2Q16513 984 aaKnown RBP14.47□□□□□ -0.09
CCS-202ENST00000525435 POTEEQ6S8J3 1075 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 TXNRD2Q9NNW7 524 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 FBXO28Q9NVF7 368 aa14.47□□□□□ -0.09
CCS-202ENST00000525435 CCDC69A6NI79 296 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 CNMDO75829 334 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 DDAH1O94760 285 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 RPS6KB1P23443 525 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 MAPK4P31152 587 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 COPB2P35606 906 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 RCAN1P53805 252 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 PRMT2P55345 433 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 FCGRTP55899 365 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 CCDC96Q2M329 555 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 KCTD1Q719H9 257 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 SHCBP1Q8NEM2 672 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 IL27Q8NEV9 243 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 ATG4CQ96DT6 458 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 SLC38A10Q9HBR0 1119 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 CYP46A1Q9Y6A2 500 aa14.46□□□□□ -0.09
CCS-202ENST00000525435 PALM3A6NDB9 673 aaPredicted RBP14.45□□□□□ -0.1
CCS-202ENST00000525435 SLC25A27O95847 323 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms