RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 CYP26C1Q6V0L0 522 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 EVA1CP58658 441 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 TTF1Q15361 905 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-202ENST00000524773 TCP11X2Q5H9J9 407 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 KANK3Q6NY19 840 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 NLRP10Q86W26 655 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 TMTC1Q8IUR5 882 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 CAGE1Q8TC20 777 aa14.84□□□□□ -0.03
CAPN1-202ENST00000524773 RRP36Q96EU6 259 aaKnown RBP14.84□□□□□ -0.03
CAPN1-202ENST00000524773 NAA15Q9BXJ9 866 aaKnown RBP14.84□□□□□ -0.03
CAPN1-202ENST00000524773 STK36Q9NRP7 1315 aa14.83□□□□□ -0.03
CAPN1-202ENST00000524773 CXCR5P32302 372 aa14.83□□□□□ -0.03
CAPN1-202ENST00000524773 KRT2P35908 639 aa14.83□□□□□ -0.03
CAPN1-202ENST00000524773 SLC7A5Q01650 507 aa14.83□□□□□ -0.03
CAPN1-202ENST00000524773 SH3RF1Q7Z6J0 888 aa14.83□□□□□ -0.03
CAPN1-202ENST00000524773 ZNF579Q8NAF0 562 aaKnown RBP14.83□□□□□ -0.03
CAPN1-202ENST00000524773 CCDC148Q8NFR7 591 aa14.83□□□□□ -0.03
CAPN1-202ENST00000524773 AATFQ9NY61 560 aaKnown RBP eCLIP14.83□□□□□ -0.036e-6■■■■■ 54.7
CAPN1-202ENST00000524773 LRP2BPQ9P2M1 347 aa14.83□□□□□ -0.03
CAPN1-202ENST00000524773 NHSL1Q5SYE7 1610 aa14.83□□□□□ -0.04
CAPN1-202ENST00000524773 AKAP11Q9UKA4 1901 aa14.83□□□□□ -0.04
CAPN1-202ENST00000524773 PIP4K2BP78356 416 aa14.83□□□□□ -0.04
CAPN1-202ENST00000524773 KRT26Q7Z3Y9 468 aa14.83□□□□□ -0.04
CAPN1-202ENST00000524773 FAM71BQ8TC56 605 aa14.83□□□□□ -0.04
CAPN1-202ENST00000524773 HPCAL4Q9UM19 191 aa14.83□□□□□ -0.04
CAPN1-202ENST00000524773 CEP131Q9UPN4 1083 aa14.83□□□□□ -0.04
CAPN1-202ENST00000524773 GOLGB1Q14789 3259 aaKnown RBP14.83□□□□□ -0.04
CAPN1-202ENST00000524773 GLI3P10071 1580 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 DNA2P51530 1060 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 MAP3K12Q12852 859 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 PAK1Q13153 545 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 WHAMMP3Q1A5X7 153 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 TTC38Q5R3I4 469 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 IRF2BP1Q8IU81 584 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 AFAP1L1Q8TED9 768 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 KRT23Q9C075 422 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 PLEKP08567 350 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-202ENST00000524773 CTR9Q6PD62 1173 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 ENAHQ8N8S7 591 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-202ENST00000524773 CTAGE1Q96RT6 745 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 JADE2Q9NQC1 790 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 COL5A2P05997 1499 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-202ENST00000524773 B4DLN1 442 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 ZPR1O75312 459 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 CCT5P48643 541 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 USP14P54578 494 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 DYNLL1P63167 89 aaKnown RBP14.82□□□□□ -0.04
CAPN1-202ENST00000524773 WDR59Q6PJI9 974 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 KIAA1328Q86T90 577 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 RASSF8Q8NHQ8 419 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 SPEF2Q9C093 1822 aa14.82□□□□□ -0.04
CAPN1-202ENST00000524773 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 IVLP07476 585 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 LIG3P49916 1009 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 TTC31Q49AM3 519 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-202ENST00000524773 FAM47AQ5JRC9 791 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 TRAPPC11Q7Z392 1133 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 HPS3Q969F9 1004 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 JAKMIP2Q96AA8 810 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 PCMTD1Q96MG8 357 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-202ENST00000524773 GSDMAQ96QA5 445 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 KAT14Q9H8E8 782 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 SAMM50Q9Y512 469 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 PARP1P09874 1014 aaKnown RBP14.81□□□□□ -0.04
CAPN1-202ENST00000524773 STIM1Q13586 685 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 MICALL1Q8N3F8 863 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 GOLGA6L1Q8N7Z2 621 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 IQUBQ8NA54 791 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 SMARCC1Q92922 1105 aaPredicted RBP14.81□□□□□ -0.04
CAPN1-202ENST00000524773 CARD10Q9BWT7 1032 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 SAR1BQ9Y6B6 198 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 PKD1L3Q7Z443 1732 aa14.81□□□□□ -0.04
CAPN1-202ENST00000524773 AGPSO00116 658 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 PRPF6O94906 941 aaKnown RBP14.8□□□□□ -0.04
CAPN1-202ENST00000524773 CYP7A1P22680 504 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 GTF2A1P52655 376 aaPredicted RBP14.8□□□□□ -0.04
CAPN1-202ENST00000524773 PHF20Q9BVI0 1012 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 JAG2Q9Y219 1238 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
CAPN1-202ENST00000524773 NPY5RQ15761 445 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 ANKRD13CQ8N6S4 541 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 GPKOWQ92917 476 aaPredicted RBP eCLIP14.8□□□□□ -0.04
CAPN1-202ENST00000524773 SELENOOQ9BVL4 669 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 CNNM2Q9H8M5 875 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 ABCA3Q99758 1704 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 ABCC12Q96J65 1359 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 LAMB4A4D0S4 1761 aa14.8□□□□□ -0.04
CAPN1-202ENST00000524773 IL2RBP14784 551 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 ARID4AP29374 1257 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 PDXDC2PQ6P474 469 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 ELOA2Q8IYF1 753 aaPredicted RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 STAG1Q8WVM7 1258 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 LIMA1Q9UHB6 759 aaKnown RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 ZC3H4Q9UPT8 1303 aaKnown RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 SRCAPQ6ZRS2 3230 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 RPN1P04843 607 aaKnown RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 ATP2B2Q01814 1243 aa14.79□□□□□ -0.04
CAPN1-202ENST00000524773 PUM3Q15397 648 aaKnown RBP14.79□□□□□ -0.04
CAPN1-202ENST00000524773 HOMEZQ8IX15 550 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms