RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 SLC44A2Q8IWA5 706 aaPredicted RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 C10orf67Q8IYJ2 551 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 DZIP1LQ8IYY4 767 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 SLC16A10Q8TF71 515 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 CTNNBL1Q8WYA6 563 aaPredicted RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 CDKL2Q92772 493 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 RBM14Q96PK6 669 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.34□□□□□ -1.231e-15■□□□□ 8.5
SDC2-208ENST00000523877 ALG1Q9BT22 464 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 CENPOQ9BU64 300 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 GRPEL1Q9HAV7 217 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 PAPOLBQ9NRJ5 636 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 RGL1Q9NZL6 768 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 HERC5Q9UII4 1024 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
SDC2-208ENST00000523877 DAAM1Q9Y4D1 1078 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 PCDHGC5Q9Y5F6 944 aa7.34□□□□□ -1.23
SDC2-208ENST00000523877 ROCK1Q13464 1354 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 TMEM232C9JQI7 657 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
SDC2-208ENST00000523877 TSPAN1O60635 241 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 FRAT2O75474 233 aaPredicted RBP7.33□□□□□ -1.24
SDC2-208ENST00000523877 RHOBTB3O94955 611 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 PAHP00439 452 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 PCP11498 1178 aaKnown RBP7.33□□□□□ -1.24
SDC2-208ENST00000523877 GZMAP12544 262 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 EPB42P16452 691 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 TNFAIP3P21580 790 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 CCNHP51946 323 aaPredicted RBP7.33□□□□□ -1.24
SDC2-208ENST00000523877 SMTNP53814 917 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 KRT83P78385 493 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 TMF1P82094 1093 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 KIF5AQ12840 1032 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 SP140Q13342 867 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 LAMB3Q13751 1172 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 LAMC2Q13753 1193 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 SEMA3AQ14563 771 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 TAF1CQ15572 869 aaPredicted RBP7.33□□□□□ -1.24
SDC2-208ENST00000523877 IMMTQ16891 758 aaKnown RBP7.33□□□□□ -1.24
SDC2-208ENST00000523877 CCDC14Q49A88 953 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 Q4G0T1 1027 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 ANKRD39Q53RE8 183 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 TEX35Q5T0J7 233 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 MZT2BQ6NZ67 158 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 FAM117BQ6P1L5 589 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 INTS8Q75QN2 995 aaKnown RBP7.33□□□□□ -1.24
SDC2-208ENST00000523877 DGLUCYQ7Z3D6 616 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 C14orf80Q86SX3 495 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 USP38Q8NB14 1042 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 C3orf20Q8ND61 904 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 B4GALNT2Q8NHY0 566 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 NRBF2Q96F24 287 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 ALPK1Q96QP1 1244 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 NACAP1Q9BZK3 213 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 ACBD3Q9H3P7 528 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 TSKSQ9UJT2 592 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 ZNF711Q9Y462 761 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 ANGPTL3Q9Y5C1 460 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 SPO11Q9Y5K1 396 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 TACC3Q9Y6A5 838 aa7.33□□□□□ -1.24
SDC2-208ENST00000523877 GOLGA8CPA6NN73 597 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 TOR1BO14657 336 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 NDC80O14777 642 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 ATP6V1G1O75348 118 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 INMTO95050 263 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 RASGRP1O95267 797 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 MCM3P25205 808 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 HALP42357 657 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 RANBP1P43487 201 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 EPHB1P54762 984 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 RAC1P63000 192 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 LRRC23Q53EV4 343 aaPredicted RBP7.32□□□□□ -1.24
SDC2-208ENST00000523877 PLBD1Q6P4A8 553 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 CRTC1Q6UUV9 634 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 ANGPTL8Q6UXH0 198 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 NLRP14Q86W24 1093 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 PPFIBP1Q86W92 1011 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 DDX42Q86XP3 938 aaKnown RBP eCLIP7.32□□□□□ -1.24
SDC2-208ENST00000523877 RAB11FIP4Q86YS3 637 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 CCDC116Q8IYX3 515 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 ESX1Q8N693 406 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 LZICQ8WZA0 190 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 ANKRD7Q92527 254 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 RABGGTAQ92696 567 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 GCC1Q96CN9 775 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 MAML3Q96JK9 1138 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 MTRQ99707 1265 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 HERPUD2Q9BSE4 406 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 STK31Q9BXU1 1019 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 NIFKQ9BYG3 293 aaKnown RBP7.32□□□□□ -1.24
SDC2-208ENST00000523877 FAM107BQ9H098 131 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 IL1RAPL1Q9NZN1 696 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 CCPG1Q9ULG6 757 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 MYO6Q9UM54 1294 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 ATP11BQ9Y2G3 1177 aa7.32□□□□□ -1.24
SDC2-208ENST00000523877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.32□□□□□ -1.24
SDC2-208ENST00000523877 K7ENM7 598 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 RTCAO00442 366 aaKnown RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 DNAJB2P25686 324 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms