RNA–Protein interactions for RNA: ENST00000523543.1

CDK16-221, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-221ENST00000523543 BMP3P12645 472 aa13.06□□□□□ -0.32
CDK16-221ENST00000523543 KIF5BP33176 963 aa13.06□□□□□ -0.32
CDK16-221ENST00000523543 GTF2A2P52657 109 aa13.06□□□□□ -0.32
CDK16-221ENST00000523543 ST3GAL1Q11201 340 aa13.06□□□□□ -0.32
CDK16-221ENST00000523543 SCRN1Q12765 414 aa13.06□□□□□ -0.32
CDK16-221ENST00000523543 RTN1Q16799 776 aa13.06□□□□□ -0.32
CDK16-221ENST00000523543 GPATCH4Q5T3I0 446 aaKnown RBP13.06□□□□□ -0.32
CDK16-221ENST00000523543 PROCA1Q8NCQ7 364 aaPredicted RBP13.06□□□□□ -0.32
CDK16-221ENST00000523543 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
CDK16-221ENST00000523543 SLKQ9H2G2 1235 aaPredicted RBP13.06□□□□□ -0.32
CDK16-221ENST00000523543 RBM28Q9NW13 759 aaKnown RBP13.06□□□□□ -0.32
CDK16-221ENST00000523543 TMOD4Q9NZQ9 345 aa13.06□□□□□ -0.32
CDK16-221ENST00000523543 NAP1L2Q9ULW6 460 aaPredicted RBP13.06□□□□□ -0.32
CDK16-221ENST00000523543 RBM19Q9Y4C8 960 aaKnown RBP13.06□□□□□ -0.32
CDK16-221ENST00000523543 CCDC196A0A1B0GTZ2 297 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
CDK16-221ENST00000523543 PLA2G6O60733 806 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 CETPP11597 493 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 CDC27P30260 824 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 GNAQP50148 359 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 FUT2Q10981 343 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 STK3Q13188 491 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 CUL4AQ13619 759 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 CCDC96Q2M329 555 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 FAM83BQ5T0W9 1011 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 TMTC3Q6ZXV5 915 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 KCTD1Q719H9 257 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 FASTKD5Q7L8L6 764 aaKnown RBP13.05□□□□□ -0.32
CDK16-221ENST00000523543 HSCBQ8IWL3 235 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 CCDC144CPQ8IYA2 1237 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 STAG2Q8N3U4 1231 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 NUP88Q99567 741 aaPredicted RBP13.05□□□□□ -0.32
CDK16-221ENST00000523543 NCOA5Q9HCD5 579 aaKnown RBP13.05□□□□□ -0.32
CDK16-221ENST00000523543 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
CDK16-221ENST00000523543 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
CDK16-221ENST00000523543 RAD21O60216 631 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 PLEKHA8P1O95397 391 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 HOXA7P31268 230 aaPredicted RBP13.04□□□□□ -0.32
CDK16-221ENST00000523543 ADD1P35611 737 aaKnown RBP13.04□□□□□ -0.32
CDK16-221ENST00000523543 CCT2P78371 535 aaKnown RBP13.04□□□□□ -0.32
CDK16-221ENST00000523543 MKRN3Q13064 507 aaKnown RBP13.04□□□□□ -0.32
CDK16-221ENST00000523543 NTRK3Q16288 839 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 SLC35G1Q2M3R5 365 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 TREML2Q5T2D2 321 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 GPAT2Q6NUI2 795 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 BTNL9Q6UXG8 535 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 NECAB1Q8N987 351 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 BRI3BPQ8WY22 251 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 RPAP3Q9H6T3 665 aaPredicted RBP13.04□□□□□ -0.32
CDK16-221ENST00000523543 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 FRMPD2Q68DX3 1309 aaPredicted RBP13.04□□□□□ -0.32
CDK16-221ENST00000523543 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
CDK16-221ENST00000523543 MYH4Q9Y623 1939 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 CCL15-CCL14A0A0B4J2E2 113 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L15C9J2P7 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L13C9JLJ4 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L11C9JVI0 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L18D6R9N7 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L22D6RA61 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L17D6RBQ6 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L19D6RCP7 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L20D6RJB6 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 DHX16O60231 1041 aaKnown RBP13.03□□□□□ -0.32
CDK16-221ENST00000523543 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 IFNAR1P17181 557 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 SMARCA1P28370 1054 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 ANP32AP39687 249 aaKnown RBP13.03□□□□□ -0.32
CDK16-221ENST00000523543 STAT2P52630 851 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 C1QTNF8P60827 252 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 USP17L24Q0WX57 530 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 CCL15Q16663 113 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 GADL1Q6ZQY3 521 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 SRBD1Q8N5C6 995 aaKnown RBP13.03□□□□□ -0.32
CDK16-221ENST00000523543 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 SPZ1Q9BXG8 430 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 GPCPD1Q9NPB8 672 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 SLC45A1Q9Y2W3 748 aa13.03□□□□□ -0.32
CDK16-221ENST00000523543 PTPRFP10586 1907 aa13.02□□□□□ -0.32
CDK16-221ENST00000523543 BTBD19C9JJ37 291 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 TMEM232C9JQI7 657 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CYTH3O43739 400 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CTDNEP1O95476 244 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 NOGQ13253 232 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 BECN1Q14457 450 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CATSPERGQ6ZRH7 1159 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 ANKRD23Q86SG2 305 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 NBPF11Q86T75 865 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 FAM160B2Q86V87 743 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CCDC83Q8IWF9 413 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CHURC1Q8WUH1 139 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 CAPNS2Q96L46 248 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 LLPHQ9BRT6 129 aaKnown RBP13.02□□□□□ -0.33
CDK16-221ENST00000523543 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.33
CDK16-221ENST00000523543 RIOX1Q9H6W3 641 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms