RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CLASRPQ8N2M8 674 aaKnown RBP27.46■■□□□ 1.99
PVT1-218ENST00000523328 SH2D4AQ9H788 454 aa27.46■■□□□ 1.99
PVT1-218ENST00000523328 PRUNE2Q8WUY3 3088 aa27.46■■□□□ 1.99
PVT1-218ENST00000523328 SLC25A27O95847 323 aa27.45■■□□□ 1.98
PVT1-218ENST00000523328 SLFNL1Q499Z3 407 aa27.45■■□□□ 1.98
PVT1-218ENST00000523328 PANK1Q8TE04 598 aa27.45■■□□□ 1.98
PVT1-218ENST00000523328 ATP8A2Q9NTI2 1148 aa27.45■■□□□ 1.98
PVT1-218ENST00000523328 NRBP1Q9UHY1 535 aa27.45■■□□□ 1.98
PVT1-218ENST00000523328 PHF24Q9UPV7 400 aa27.45■■□□□ 1.98
PVT1-218ENST00000523328 MYH7P12883 1935 aa27.44■■□□□ 1.98
PVT1-218ENST00000523328 SMAD3P84022 425 aaKnown RBP27.44■■□□□ 1.98
PVT1-218ENST00000523328 TLE2Q04725 743 aa27.44■■□□□ 1.98
PVT1-218ENST00000523328 SAMD1Q6SPF0 538 aaPredicted RBP27.44■■□□□ 1.98
PVT1-218ENST00000523328 KIF1BPQ96EK5 621 aa27.44■■□□□ 1.98
PVT1-218ENST00000523328 CCDC17Q96LX7 622 aa27.44■■□□□ 1.98
PVT1-218ENST00000523328 CYP2D7A0A087X1C5 515 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 MBD4O95243 580 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 ITGB8P26012 769 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 ADD2P35612 726 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 CDK8P49336 464 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 C12orf60Q5U649 245 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 TTYH1Q9H313 450 aaPredicted RBP27.43■■□□□ 1.98
PVT1-218ENST00000523328 XPNPEP3Q9NQH7 507 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 FBXO28Q9NVF7 368 aa27.43■■□□□ 1.98
PVT1-218ENST00000523328 APBB1O00213 710 aa27.42■■□□□ 1.98
PVT1-218ENST00000523328 IFIT2P09913 472 aaKnown RBP27.42■■□□□ 1.98
PVT1-218ENST00000523328 RIOX2Q8IUF8 465 aa27.42■■□□□ 1.98
PVT1-218ENST00000523328 MMP19Q99542 508 aa27.42■■□□□ 1.98
PVT1-218ENST00000523328 ROBO3Q96MS0 1386 aa27.42■■□□□ 1.98
PVT1-218ENST00000523328 PGK2P07205 417 aa27.41■■□□□ 1.98
PVT1-218ENST00000523328 RARBP10826 455 aa27.41■■□□□ 1.98
PVT1-218ENST00000523328 EEF2P13639 858 aaKnown RBP27.41■■□□□ 1.98
PVT1-218ENST00000523328 ZNF792Q3KQV3 632 aa27.41■■□□□ 1.98
PVT1-218ENST00000523328 C16orf86Q6ZW13 317 aa27.41■■□□□ 1.98
PVT1-218ENST00000523328 MAFAQ8NHW3 353 aaPredicted RBP27.41■■□□□ 1.98
PVT1-218ENST00000523328 TINF2Q9BSI4 451 aa27.41■■□□□ 1.98
PVT1-218ENST00000523328 PAG1Q9NWQ8 432 aa27.41■■□□□ 1.98
PVT1-218ENST00000523328 DIS3Q9Y2L1 958 aaKnown RBP27.41■■□□□ 1.98
PVT1-218ENST00000523328 TACC3Q9Y6A5 838 aa27.41■■□□□ 1.98
PVT1-218ENST00000523328 USP17L12C9JPN9 530 aa27.4■■□□□ 1.98
PVT1-218ENST00000523328 USP17L21D6R901 530 aa27.4■■□□□ 1.98
PVT1-218ENST00000523328 PGK1P00558 417 aa27.4■■□□□ 1.98
PVT1-218ENST00000523328 TAL1P17542 331 aaPredicted RBP27.4■■□□□ 1.98
PVT1-218ENST00000523328 GREB1LQ9C091 1923 aaPredicted RBP27.39■■□□□ 1.98
PVT1-218ENST00000523328 VWA5AO00534 786 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 CHGBP05060 677 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 CLTBP09497 229 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 ZNF865P0CJ78 1059 aaPredicted RBP27.39■■□□□ 1.98
PVT1-218ENST00000523328 HNRNPUQ00839 825 aaKnown RBP eCLIP27.39■■□□□ 1.981e-6■■■■□ 21.2
PVT1-218ENST00000523328 SIRT2Q8IXJ6 389 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 REPS2Q8NFH8 660 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 MYLIPQ8WY64 445 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 BOLA2Q9H3K6 86 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 KANSL2Q9H9L4 492 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 ZNF214Q9UL59 606 aaPredicted RBP27.39■■□□□ 1.98
PVT1-218ENST00000523328 PPP1R9AQ9ULJ8 1098 aa27.39■■□□□ 1.98
PVT1-218ENST00000523328 STAT3P40763 770 aa27.38■■□□□ 1.97
PVT1-218ENST00000523328 EPHB4P54760 987 aa27.38■■□□□ 1.97
PVT1-218ENST00000523328 KCTD2Q14681 263 aa27.38■■□□□ 1.97
PVT1-218ENST00000523328 RNF180Q86T96 592 aa27.38■■□□□ 1.97
PVT1-218ENST00000523328 ZBED9Q6R2W3 1325 aa27.38■■□□□ 1.97
PVT1-218ENST00000523328 SPTBN5Q9NRC6 3674 aaKnown RBP27.37■■□□□ 1.97
PVT1-218ENST00000523328 A0A1W2PQ45 241 aaPredicted RBP27.37■■□□□ 1.97
PVT1-218ENST00000523328 A0A1W2PQY0 241 aa27.37■■□□□ 1.97
PVT1-218ENST00000523328 KIAA0355O15063 1070 aa27.37■■□□□ 1.97
PVT1-218ENST00000523328 RPAP2Q8IXW5 612 aaPredicted RBP27.37■■□□□ 1.97
PVT1-218ENST00000523328 ADAMTS4O75173 837 aa27.36■■□□□ 1.97
PVT1-218ENST00000523328 ATP5JP18859 108 aa27.36■■□□□ 1.97
PVT1-218ENST00000523328 AMOTL1Q8IY63 956 aa27.36■■□□□ 1.97
PVT1-218ENST00000523328 LENG1Q96BZ8 264 aaPredicted RBP27.36■■□□□ 1.97
PVT1-218ENST00000523328 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.36■■□□□ 1.97
PVT1-218ENST00000523328 BCL11AQ9H165 835 aa27.36■■□□□ 1.97
PVT1-218ENST00000523328 GOPCQ9HD26 462 aa27.36■■□□□ 1.97
PVT1-218ENST00000523328 AKR1A1P14550 325 aa27.35■■□□□ 1.97
PVT1-218ENST00000523328 UBE3CQ15386 1083 aa27.35■■□□□ 1.97
PVT1-218ENST00000523328 FAM83BQ5T0W9 1011 aa27.35■■□□□ 1.97
PVT1-218ENST00000523328 CTR9Q6PD62 1173 aa27.35■■□□□ 1.97
PVT1-218ENST00000523328 RNPC3Q96LT9 517 aaKnown RBP27.35■■□□□ 1.97
PVT1-218ENST00000523328 HAUS7Q99871 368 aa27.35■■□□□ 1.97
PVT1-218ENST00000523328 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.35■■□□□ 1.97
PVT1-218ENST00000523328 PQBP1O60828 265 aaKnown RBP27.34■■□□□ 1.97
PVT1-218ENST00000523328 RAB11FIP3O75154 756 aa27.34■■□□□ 1.97
PVT1-218ENST00000523328 HMMRO75330 724 aa27.34■■□□□ 1.97
PVT1-218ENST00000523328 RAG1P15918 1043 aa27.34■■□□□ 1.97
PVT1-218ENST00000523328 COPB2P35606 906 aa27.34■■□□□ 1.97
PVT1-218ENST00000523328 SLC4A4Q9Y6R1 1079 aa27.34■■□□□ 1.97
PVT1-218ENST00000523328 TMEM265A0A087WTH1 108 aa27.33■■□□□ 1.97
PVT1-218ENST00000523328 FAAP100Q0VG06 881 aa27.32■■□□□ 1.96
PVT1-218ENST00000523328 ANKRD33Q7Z3H0 272 aa27.32■■□□□ 1.96
PVT1-218ENST00000523328 DDRGK1Q96HY6 314 aa27.32■■□□□ 1.96
PVT1-218ENST00000523328 TOX2Q96NM4 488 aa27.32■■□□□ 1.96
PVT1-218ENST00000523328 TSEN34Q9BSV6 310 aaKnown RBP27.32■■□□□ 1.96
PVT1-218ENST00000523328 ZBTB40Q9NUA8 1239 aa27.32■■□□□ 1.96
PVT1-218ENST00000523328 TMEM39AQ9NV64 488 aa27.32■■□□□ 1.96
PVT1-218ENST00000523328 CNPY2Q9Y2B0 182 aa27.32■■□□□ 1.96
PVT1-218ENST00000523328 RAD21O60216 631 aa27.31■■□□□ 1.96
PVT1-218ENST00000523328 FOSL2P15408 326 aa27.31■■□□□ 1.96
PVT1-218ENST00000523328 FPGSQ05932 587 aa27.31■■□□□ 1.96
PVT1-218ENST00000523328 MSL3Q8N5Y2 521 aaKnown RBP27.31■■□□□ 1.96
PVT1-218ENST00000523328 PUS7LQ9H0K6 701 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms