RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 DEFB123Q8N688 67 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 SLC17A8Q8NDX2 589 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 SHCBP1Q8NEM2 672 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 FERMT2Q96AC1 680 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 CCDC17Q96LX7 622 aa18.53■□□□□ 0.56
MRPS28-209ENST00000522987 LAMA3Q16787 3333 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 STRNO43815 780 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 MSCO60682 206 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 OLFML2BQ68BL8 750 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 MB21D1Q8N884 522 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 CHMP4BQ9H444 224 aaKnown RBP18.52■□□□□ 0.56
MRPS28-209ENST00000522987 MROH8Q9H579 483 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 ECHDC1Q9NTX5 307 aa18.52■□□□□ 0.56
MRPS28-209ENST00000522987 DNM1LO00429 736 aa18.51■□□□□ 0.55
MRPS28-209ENST00000522987 FCER1AP12319 257 aa18.51■□□□□ 0.55
MRPS28-209ENST00000522987 ZSCAN25Q6NSZ9 544 aa18.51■□□□□ 0.55
MRPS28-209ENST00000522987 MAML3Q96JK9 1138 aa18.51■□□□□ 0.55
MRPS28-209ENST00000522987 STRBPQ96SI9 672 aaKnown RBP18.51■□□□□ 0.55
MRPS28-209ENST00000522987 MMP19Q99542 508 aa18.51■□□□□ 0.55
MRPS28-209ENST00000522987 PRDM5Q9NQX1 630 aaPredicted RBP18.51■□□□□ 0.55
MRPS28-209ENST00000522987 KBTBD13C9JR72 458 aa18.5■□□□□ 0.55
MRPS28-209ENST00000522987 IGHA2P01877 340 aa18.5■□□□□ 0.55
MRPS28-209ENST00000522987 FAM47AQ5JRC9 791 aa18.5■□□□□ 0.55
MRPS28-209ENST00000522987 OSBP2Q969R2 916 aa18.5■□□□□ 0.55
MRPS28-209ENST00000522987 LENG1Q96BZ8 264 aaPredicted RBP18.5■□□□□ 0.55
MRPS28-209ENST00000522987 CHMP4CQ96CF2 233 aa18.5■□□□□ 0.55
MRPS28-209ENST00000522987 LBHD1Q9BQE6 289 aaPredicted RBP18.5■□□□□ 0.55
MRPS28-209ENST00000522987 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.5■□□□□ 0.55
MRPS28-209ENST00000522987 KANSL2Q9H9L4 492 aa18.5■□□□□ 0.55
MRPS28-209ENST00000522987 GOPCQ9HD26 462 aa18.5■□□□□ 0.55
MRPS28-209ENST00000522987 GSG1L2A8MUP6 293 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 M0R2C6 588 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 SEPT4O43236 478 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 PRDM1O75626 825 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 TAL1P17542 331 aaPredicted RBP18.49■□□□□ 0.55
MRPS28-209ENST00000522987 RASA1P20936 1047 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 ADCYAP1R1P41586 468 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 LRIT3Q3SXY7 679 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 SLC5A4Q9NY91 659 aa18.49■□□□□ 0.55
MRPS28-209ENST00000522987 ARPP21Q9UBL0 812 aaPredicted RBP18.49■□□□□ 0.55
MRPS28-209ENST00000522987 COL6A3P12111 3177 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 VWA5AO00534 786 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 APPP05067 770 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 STAT3P40763 770 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 TRIM60Q495X7 471 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 SLC39A5Q6ZMH5 540 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 KBTBD3Q8NAB2 608 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 FAM161BQ96MY7 647 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 MKNK2Q9HBH9 465 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 EPB41L4AQ9HCS5 686 aaPredicted RBP18.48■□□□□ 0.55
MRPS28-209ENST00000522987 PRKAG2Q9UGJ0 569 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 PPP1R9AQ9ULJ8 1098 aa18.48■□□□□ 0.55
MRPS28-209ENST00000522987 SLC25A27O95847 323 aa18.47■□□□□ 0.55
MRPS28-209ENST00000522987 TDO2P48775 406 aa18.47■□□□□ 0.55
MRPS28-209ENST00000522987 LRRC41Q15345 812 aa18.47■□□□□ 0.55
MRPS28-209ENST00000522987 RIOX2Q8IUF8 465 aa18.47■□□□□ 0.55
MRPS28-209ENST00000522987 APPBP2Q92624 585 aa18.47■□□□□ 0.55
MRPS28-209ENST00000522987 RNF113AO15541 343 aaKnown RBP18.46■□□□□ 0.55
MRPS28-209ENST00000522987 GPAA1O43292 621 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 PGK1P00558 417 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 KCTD2Q14681 263 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 SH3RF1Q7Z6J0 888 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 ABRAQ8N0Z2 381 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 CPXCR1Q8N123 301 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 REPS2Q8NFH8 660 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 OTUD7AQ8TE49 926 aaPredicted RBP18.46■□□□□ 0.55
MRPS28-209ENST00000522987 GPATCH3Q96I76 525 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 SEC62Q99442 399 aaKnown RBP18.46■□□□□ 0.55
MRPS28-209ENST00000522987 MTMR10Q9NXD2 777 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 CLIP2Q9UDT6 1046 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 ZNF214Q9UL59 606 aaPredicted RBP18.46■□□□□ 0.55
MRPS28-209ENST00000522987 ADAMTS5Q9UNA0 930 aa18.46■□□□□ 0.55
MRPS28-209ENST00000522987 F5H6K3 240 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 NDUFB10O96000 172 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 KLRC3Q07444 240 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 SBK1Q52WX2 424 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 SNRNP48Q6IEG0 339 aaKnown RBP18.45■□□□□ 0.54
MRPS28-209ENST00000522987 LRRC47Q8N1G4 583 aaKnown RBP18.45■□□□□ 0.54
MRPS28-209ENST00000522987 SLF1Q9BQI6 1058 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 DCTPP1Q9H773 170 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 XPNPEP3Q9NQH7 507 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 ISY1Q9ULR0 285 aaKnown RBP18.45■□□□□ 0.54
MRPS28-209ENST00000522987 RIPK3Q9Y572 518 aa18.45■□□□□ 0.54
MRPS28-209ENST00000522987 ZNF792Q3KQV3 632 aa18.44■□□□□ 0.54
MRPS28-209ENST00000522987 BADQ92934 168 aa18.44■□□□□ 0.54
MRPS28-209ENST00000522987 KIFC2Q96AC6 838 aa18.44■□□□□ 0.54
MRPS28-209ENST00000522987 TINF2Q9BSI4 451 aa18.44■□□□□ 0.54
MRPS28-209ENST00000522987 DLL1O00548 723 aa18.43■□□□□ 0.54
MRPS28-209ENST00000522987 RARBP10826 455 aa18.43■□□□□ 0.54
MRPS28-209ENST00000522987 C9orf50Q5SZB4 431 aa18.43■□□□□ 0.54
MRPS28-209ENST00000522987 RAVER2Q9HCJ3 691 aaKnown RBP18.43■□□□□ 0.54
MRPS28-209ENST00000522987 PDLIM7Q9NR12 457 aa18.43■□□□□ 0.54
MRPS28-209ENST00000522987 ROBO3Q96MS0 1386 aa18.42■□□□□ 0.54
MRPS28-209ENST00000522987 TRIM43BA6NCK2 446 aa18.42■□□□□ 0.54
MRPS28-209ENST00000522987 IRX5P78411 483 aaPredicted RBP18.42■□□□□ 0.54
MRPS28-209ENST00000522987 SHHQ15465 462 aa18.42■□□□□ 0.54
MRPS28-209ENST00000522987 ZNF444Q8N0Y2 327 aaPredicted RBP18.42■□□□□ 0.54
MRPS28-209ENST00000522987 TRIM43Q96BQ3 446 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms