RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
CTNNA1-235ENST00000522730 CLIP2Q9UDT6 1046 aa12.24□□□□□ -0.45
CTNNA1-235ENST00000522730 BAZ2AQ9UIF9 1905 aaKnown RBP12.24□□□□□ -0.45
CTNNA1-235ENST00000522730 TTC41PQ6P2S7 1318 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 WDR46O15213 610 aaKnown RBP12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 STRNO43815 780 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 SYN1P17600 705 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 RASA1P20936 1047 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 MNX1P50219 401 aaPredicted RBP12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 TMEM132BQ14DG7 1078 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 SBK1Q52WX2 424 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 PRAMEF19Q5SWL8 479 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 ANO1Q5XXA6 986 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 LHX8Q68G74 356 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 NACAP1Q9BZK3 213 aa12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 ISY1Q9ULR0 285 aaKnown RBP12.23□□□□□ -0.45
CTNNA1-235ENST00000522730 DNAH12Q6ZR08 3092 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 COBLO75128 1261 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 FCER1AP12319 257 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 GNAT2P19087 354 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 MX1P20591 662 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 GIMAP6Q6P9H5 292 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 IFNL3Q8IZI9 196 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 PI4K2BQ8TCG2 481 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 SENP6Q9GZR1 1112 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 MROH8Q9H579 483 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 CTDP1Q9Y5B0 961 aaPredicted RBP12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 PLXNB2O15031 1838 aa12.22□□□□□ -0.45
CTNNA1-235ENST00000522730 F5H6K3 240 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 PGK2P07205 417 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 HOXC6P09630 235 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 STAT3P40763 770 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 KLRC3Q07444 240 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 FAM47AQ5JRC9 791 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 B4GALNT3Q6L9W6 998 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 SHCBP1Q8NEM2 672 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 TRPV1Q8NER1 839 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 MMP19Q99542 508 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 NAPBQ9H115 298 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 ZNF287Q9HBT7 754 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 SLC5A4Q9NY91 659 aa12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 DDX20Q9UHI6 824 aaKnown RBP12.21□□□□□ -0.45
CTNNA1-235ENST00000522730 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 VWA5AO00534 786 aa12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 SLC25A27O95847 323 aa12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 SLC3A2P08195 630 aaKnown RBP12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 GJC2Q5T442 439 aaPredicted RBP12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 CPXCR1Q8N123 301 aa12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 KIFC2Q96AC6 838 aa12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 INCENPQ9NQS7 918 aa12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 PPP1R9AQ9ULJ8 1098 aa12.2□□□□□ -0.46
CTNNA1-235ENST00000522730 PFASO15067 1338 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 NDUFB10O96000 172 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 TSPY3P0CV98 308 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 TSPY8P0CW00 308 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 TFAP4Q01664 338 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 PDE4BQ07343 736 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 KCTD2Q14681 263 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 LRRC26Q2I0M4 334 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 SLF1Q9BQI6 1058 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 MTMR7Q9Y216 660 aa12.19□□□□□ -0.46
CTNNA1-235ENST00000522730 MYH7P12883 1935 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 TRIM6-TRIM34B2RNG4 842 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 ZBED4O75132 1171 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 CTDSPL2Q05D32 466 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 PPARAQ07869 468 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 OLFML2BQ68BL8 750 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 SNRNP48Q6IEG0 339 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 RIOX2Q8IUF8 465 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 TOMM22Q9NS69 142 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 MTMR4Q9NYA4 1195 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 ADAMTS5Q9UNA0 930 aa12.18□□□□□ -0.46
CTNNA1-235ENST00000522730 MYH8P13535 1937 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 RANBP6O60518 1105 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 MSCO60682 206 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 TTLL1O95922 423 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 COL6A1P12109 1028 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 CYBAP13498 195 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 MAGEA10P43363 369 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 PDE1AP54750 535 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 IKQ13123 557 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 SLFN13Q68D06 897 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 ABRAQ8N0Z2 381 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 PRPF38AQ8NAV1 312 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 RILPL2Q969X0 211 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 FERMT2Q96AC1 680 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 EVI5LQ96CN4 794 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 DDX11Q96FC9 970 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms