RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 NEDD4P46934 1319 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 XDHP47989 1333 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 A0A0G2JLW4 131 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 SOBPA7XYQ1 873 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 CTAGE5O15320 804 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 ZBTB43O43298 467 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 GADD45BO75293 160 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 YEATS4O95619 227 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 BMP2P12643 396 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 FDPSP14324 419 aaKnown RBP7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 CYP7A1P22680 504 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 HOXA10P31260 410 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 TDO2P48775 406 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 METAP2P50579 478 aaKnown RBP eCLIP7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 ST5P78524 1137 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 RELBQ01201 579 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 NFIXQ14938 502 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 SBK1Q52WX2 424 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 PTF1AQ7RTS3 328 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 KRT27Q7Z3Y8 459 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 LCORLQ8N3X6 602 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 FBXO18Q8NFZ0 1043 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 WDR66Q8TBY9 1149 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 FUCA2Q9BTY2 467 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 LRRC2Q9BYS8 371 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 PANK2Q9BZ23 570 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 RBSNQ9H1K0 784 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 ARMT1Q9H993 441 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 LY9Q9HBG7 655 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 MORC2Q9Y6X9 1032 aaPredicted RBP7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 TAF1P21675 1872 aa7.79□□□□□ -1.16
CTNNA1-228ENST00000521640 ECM29Q5VYK3 1845 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 A0A1W2PQ27 194 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 A0A1W2PQ64 194 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 A0A1W2PQD8 194 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ERICH2A1L162 156 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 GOLGA6L4A6NEF3 574 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 B4E1Z4 1266 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 PLSCR1O15162 318 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ORC4O43929 436 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 BBOX1O75936 387 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CALM1P0DP23 149 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CALM2P0DP24 149 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CALM3P0DP25 149 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 GYS1P13807 737 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 IFNAR1P17181 557 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ATP2B4P23634 1241 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 GYG1P46976 350 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CCT2P78371 535 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 GSTO1P78417 241 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 PPARAQ07869 468 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 TMEM67Q5HYA8 995 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 PRR5LQ6MZQ0 368 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 SYNE3Q6ZMZ3 975 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 BICDL1Q6ZP65 573 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CYB5R4Q7L1T6 521 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 FLAD1Q8NFF5 587 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 KCNG4Q8TDN1 519 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ZNF592Q92610 1267 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ESR2Q92731 530 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 KIFC2Q96AC6 838 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 NSUN4Q96CB9 384 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CHAMP1Q96JM3 812 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 C8orf76Q96K31 380 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CRAMP1Q96RY5 1269 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 TSEN34Q9BSV6 310 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CRNKL1Q9BZJ0 848 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 NUP62CLQ9H1M0 184 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ALG2Q9H553 416 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 QTRT2Q9H974 415 aaKnown RBP7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 LRRC4BQ9NT99 713 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 PODXL2Q9NZ53 605 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 RTEL1Q9NZ71 1219 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 RAI14Q9P0K7 980 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ORC3Q9UBD5 711 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ARPP21Q9UBL0 812 aaPredicted RBP7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 ROBO3Q96MS0 1386 aa7.78□□□□□ -1.16
CTNNA1-228ENST00000521640 CCDC69A6NI79 296 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 SNAP23O00161 211 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 PIK3CDO00329 1044 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 ADH1AP07327 375 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 SLC3A2P08195 630 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 CCDC192P0DO97 292 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 ERVK-9P63128 1117 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 SEMA3FQ13275 785 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 NTRK3Q16288 839 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 MAP3K11Q16584 847 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 CCDC178Q5BJE1 867 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 ZNF772Q68DY9 489 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 ZNF804AQ7Z570 1209 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 FERMT3Q86UX7 667 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 TDRD7Q8NHU6 1098 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 ZNF775Q96BV0 537 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 TRIM44Q96DX7 344 aaPredicted RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 DDX11Q96FC9 970 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 RBM17Q96I25 401 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 CLSTN2Q9H4D0 955 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 ZNF395Q9H8N7 513 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms